| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0760 |
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| Symbol | rimK |
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| ID | 6986643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 849441 |
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| End bp | 850346 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379159 |
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| Product | ribosomal protein S6 modification protein |
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| Protein accession | YP_002262276 |
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| Protein GI | 209694348 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00088888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATCG GTATTTTATC TCGTAACCAA GACCTTTACT CTACTCGCCG TTTAATTGAA
GCGGCGGAAA GCCGTGGTCA TGAAGTAAAA GTAATTGATG CATTACGCTG TTATATGAAT
ATCAATTCAG AAAAACCTCA AATTCACTTC AAAGGTGAAG AACTGATTAA TTACGATGCG
ATTATCCCTC GTATTGGCGC ATCAGTTACT TTTTATGGTA CTGCTGTATT ACGTCAATTT
GAAATGATGA ATGTCTACCC GGTGAACGAA TCTGTTGCTA TCACTCGTTC TCGCGATAAA
TTACGTTCAA TGCAACTGCT TTCTCGTAAA GGCATTGGTA TGCCAATCAC GGGTTTTGCA
AGCAAGCCTG ATGATGTAAA AGATTTACTT GATATGGTTG GCGGCGGGCC AGTTGTGATC
AAGCTCTTAG AAGGCACTCA AGGTATTGGT GTTGTTCTTG CAGAAACAAG AAAAGCAGCA
GAAAGTGTTG TTGAAGCATT TATGGGCTTA AAAGCGAATA TTATGGTTCA AGAGTTCATC
AAAGAAGCTG GTGGTGCAGA TATCCGTTGT TTCGTTATTG GTGGCAAAGT GATTGCAGCA
ATGAAACGTC AAGGTGCAGA AGGCGAATTC CGTTCTAACC TACACCGTGG TGGTTCTGCG
TCACTGGTTA AACTGACTCC AGAAGAACGT AAAACAGCAG TAGCAGCAGC AAATATCATG
GGATTGAACG TAGCAGGTGT CGATTTACTT CGCTCTGATC GTGGTCCATT AGTTATGGAA
GTGAACTCTT CACCTGGCTT AGAAGGCATT GAAGCCGCTA CAGGTAAAGA CGTTGCTGGT
TTAATTGTTG ATTTTATTGA GAAAAATGCA GCGACAAAAG GGACTAAAAC TCGTGGCAAA
GGCTAG
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| Protein sequence | MKIGILSRNQ DLYSTRRLIE AAESRGHEVK VIDALRCYMN INSEKPQIHF KGEELINYDA
IIPRIGASVT FYGTAVLRQF EMMNVYPVNE SVAITRSRDK LRSMQLLSRK GIGMPITGFA
SKPDDVKDLL DMVGGGPVVI KLLEGTQGIG VVLAETRKAA ESVVEAFMGL KANIMVQEFI
KEAGGADIRC FVIGGKVIAA MKRQGAEGEF RSNLHRGGSA SLVKLTPEER KTAVAAANIM
GLNVAGVDLL RSDRGPLVME VNSSPGLEGI EAATGKDVAG LIVDFIEKNA ATKGTKTRGK
G
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