| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0717 |
|---|
| Symbol | iscS |
|---|
| ID | 6986619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 802296 |
|---|
| End bp | 803516 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643379117 |
|---|
| Product | cysteine desulfurase |
|---|
| Protein accession | YP_002262234 |
|---|
| Protein GI | 209694306 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA AACTGCCAAT TTACTTTGAT TATTCGGCGA CTTGTCCTGT TGATAAGCGC
GTAGCCGATA AAATGGTTCA ACATATGACT ATGGATGGAT GCTTTGGTAA CCCAGCATCA
CGTTCACACC GTTACGGATG GCAGGCTGAA GAAGCAGTAG ATACTGCTCG TGACAATATT
GCTGCTTTAT TAAATGCCGA TCCACGTGAG ATCGTATTTA CATCAGGCGC TACAGAATCA
GATAACCTTG CAATTAAAGG TGCTGCGCAT TTCTATCATA AGAAAGGTAA GCACGTAATT
ACATGTAAAA CTGAGCATAA AGCGGTTCTT GATCCATGTC GTCAACTTGA GCGCGAAGGC
TATGAAGTGA CGTACTTAGA TCCAGAATCA AATGGTTTGG TTGATTTCGC TAAATTAGAA
GCAGCAATGC GTGAAGACAC GGTTCTTGTT TCTATTATGC ACGTAAATAA TGAAATTGGT
GTGATTCAAG ATATCACGGC AATCGGTGAA CTTTGTCGTT CACGTAAAAT TGTTTTCCAT
GTAGATGCGG CGCAATCAGC GGGTAAAATC CCACTTGATG TACAAGAAGT GAAAGTAGAT
TTAATCTCAC TTTCTGCTCA TAAAATGTAT GGCCCTAAAG GCATTGGTGC ATTGTACGTT
CGTCGTAAAC CACGTATTCG TTTAGAAGCA CAAATGCACG GTGGTGGCCA CGAACGAGGT
TTCCGTTCTG GTACATTAGC AACTCACCAA ATTGTTGGTA TGGGTGAAGC CTGTCGTATT
GCAAAAGAAG AGATGCAAAA AGATTACGAC CATTGCCTAG CAATGCGTGA TCGTCTTCTT
GATGGTGTTA AAGATATGGA AGCGGTACAC ATTAATGGTG ATTTAGACCA ACGTGTACCA
CATAACTTAA ACATCAGCTT TGAGTTTGTT GAAGGTGAAT CATTGCTAAT GGCATTGAAA
GATCTTGCTG TTTCTTCTGG TTCAGCATGT ACTTCAGCGA GTCTTGAACC ATCGTATGTA
TTGCGTGCAT TAGGCTTGAA TGATGAATTA GCACACAGTT CAATTCGTTT CTCTTTTGGT
CGTTATACAA CGGCAGAAGA CATTGATCAT GCAATTACAC AAATTAGCCA GGCAGTAAAT
AAACTGCGTG ATATGTCTCC GTTATGGGAT ATGTACAAAG AAGGCATCGA CTTAAACACG
GTTGAGTGGG CACACCACTA A
|
|---|
| Protein sequence | MKMKLPIYFD YSATCPVDKR VADKMVQHMT MDGCFGNPAS RSHRYGWQAE EAVDTARDNI
AALLNADPRE IVFTSGATES DNLAIKGAAH FYHKKGKHVI TCKTEHKAVL DPCRQLEREG
YEVTYLDPES NGLVDFAKLE AAMREDTVLV SIMHVNNEIG VIQDITAIGE LCRSRKIVFH
VDAAQSAGKI PLDVQEVKVD LISLSAHKMY GPKGIGALYV RRKPRIRLEA QMHGGGHERG
FRSGTLATHQ IVGMGEACRI AKEEMQKDYD HCLAMRDRLL DGVKDMEAVH INGDLDQRVP
HNLNISFEFV EGESLLMALK DLAVSSGSAC TSASLEPSYV LRALGLNDEL AHSSIRFSFG
RYTTAEDIDH AITQISQAVN KLRDMSPLWD MYKEGIDLNT VEWAHH
|
|---|
| |