Gene VSAL_I0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0716 
Symbol 
ID6989433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp801764 
End bp802270 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content41% 
IMG OID643379116 
ProductHTH-type transcriptional regulator 
Protein accessionYP_002262233 
Protein GI209694305 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR02010] iron-sulfur cluster assembly transcription factor IscR
[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA CTTCGAAAGG AAGGTATGCA GTAACGGCAA TGCTTGATGT TGCACTGCAT 
GCTCAAGAAG GGCCTGTGCC ACTTGCCGAT ATATCGGAAC GACAGGGAAT TTCATTATCT
TATCTTGAAC AATTATTCTC TAAATTACGC AAAGCTGGTT TAGTTGCTAG TGTTCGAGGT
CCAGGTGGTG GTTATCGCTT AGGATTAAAA CCAGATGAAA TTGCGGTTGG AATGGTTATT
TCGGCGGTTG ATGAATCGGT TGATGCAACT AAGTGCCATG GTAAAGAAGG TTGTCAAGGT
GGCACGCGTT GTTTAACGCA CACATTGTGG CGTGATTTAA GTTCACGTAT CAGTAGCTTC
TTAGATGGTA TAAGCCTTGG TGAGTTGATG GTTGATAATG AAGTTCAACA AGTATCAGAT
CGACAAAACA TCGATGCAGC CTTAAATAAT GGGTTAGTAA CGAATTCAAA ATTAACAAAT
TCTGTGGGTG TTAATGTCCG CTTTTGA
 
Protein sequence
MKLTSKGRYA VTAMLDVALH AQEGPVPLAD ISERQGISLS YLEQLFSKLR KAGLVASVRG 
PGGGYRLGLK PDEIAVGMVI SAVDESVDAT KCHGKEGCQG GTRCLTHTLW RDLSSRISSF
LDGISLGELM VDNEVQQVSD RQNIDAALNN GLVTNSKLTN SVGVNVRF