| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0690 |
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| Symbol | sufS |
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| ID | 6986605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 775361 |
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| End bp | 776578 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379089 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_002262207 |
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| Protein GI | 209694279 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily
[TIGR03392] cysteine desulfurase, catalytic subunit CsdA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.144442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAT TTACTATTGA CGCTGTTCGT TCTCAATTTC CCGCTCTATC ACAAAAAATT
AACGGGCAAC CTATCGCTTA TTTTGACAGC GCTGCCACCA CTCAAAAACC AAAAGTGGTA
TTAAATGCGA TTCAAGATTA TTACCAAAAT GATAATGCTA ACGTGCATCG TGGTAGTCAC
AGTCTAACCG CCTCCGCAAC CTTAAAATTT GAACAAGCAA GAGCAACCGT TCAGCAGTTT
ATTAATGCGA AAAACGCTAA AGAAATAATT TGGACTCGCG GGGCAACAGA GGCTATCAAT
CTAATCGCGC AAACTTACGC TCGTAGCACA TTACAGCCAG GTAATGAGAT CCTAATTAGT
GAATTGGAAC ATCATGCTAA TATTGTGCCT TGGCAAATTG TGGCAGAGCA AACTGGCGCA
AAGATTATAA AAATACCAAT GAAACAAGAT TGCACATTAG ATATGTTAGC TTTTGAGTCA
TTGGTAACCC AGAACACAAA AATCATCGCT ATCGCTCAAG TAACCAATGT AACAGGAACA
TTAAACCCGA TTGATACCAT AATAAAAGCA GCGCATAACG TGGGAGCTAT TGTCGTTATT
GACGGTGCTC AAGGTATTGT TCATCACGAT ATTGATGTCC AAGCAATGGA TGCGGATTTT
TACGTTTTCT CTGGGCATAA ACTGTTTGCG CCAGCAGGCA TTGGGGCTCT CTATGGTAAA
CAGCATCTAT TGGAGTCGAT GCCAGTTTGG CATGGTGGCG GTAAAATGGT TGAAAAGGTT
TCATTTGAAA AAACCACGTT TGCAGAACTT CCGGGGAAAT TTGAAGCGGG AACACCAAAT
GTAGCTGGTG CGATTGCCTT TGCTACTGCA ATTAAGTGGA TTAAACAATT CGCCCACGAT
GATCTAAATA CTCATATTAA CGAACTTCGT CATATGGCCA TTGATGGAAT TAAAGACATT
GAAGACTTAC GTTTTATAGG GCTACAAGAT AATGCGAGTT TATTTTCTTT TGTGATTGAT
GGTGTTCACC ACCAAGATAT TGCGACTTTA TTAGATCAAC AAGGCATTGC TGTACGCTCA
GGTAACCATT GTGCGCACCC TATGTTAGAC GCATTAGGAT TAACGGGAAC TGTACGCGTT
TCATTTGCCT TGTATAATAC TAAGCAAGAT GTTCAACGTT TTATCGACGC GCTAAATAAA
GCCGCTGATA TGCTATAA
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| Protein sequence | MTAFTIDAVR SQFPALSQKI NGQPIAYFDS AATTQKPKVV LNAIQDYYQN DNANVHRGSH
SLTASATLKF EQARATVQQF INAKNAKEII WTRGATEAIN LIAQTYARST LQPGNEILIS
ELEHHANIVP WQIVAEQTGA KIIKIPMKQD CTLDMLAFES LVTQNTKIIA IAQVTNVTGT
LNPIDTIIKA AHNVGAIVVI DGAQGIVHHD IDVQAMDADF YVFSGHKLFA PAGIGALYGK
QHLLESMPVW HGGGKMVEKV SFEKTTFAEL PGKFEAGTPN VAGAIAFATA IKWIKQFAHD
DLNTHINELR HMAIDGIKDI EDLRFIGLQD NASLFSFVID GVHHQDIATL LDQQGIAVRS
GNHCAHPMLD ALGLTGTVRV SFALYNTKQD VQRFIDALNK AADML
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