| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0678 |
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| Symbol | |
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| ID | 6986600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 755360 |
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| End bp | 756235 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379077 |
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| Product | HTH-type transciptional regulator, LysR-family |
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| Protein accession | YP_002262195 |
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| Protein GI | 209694267 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0849029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATTT CACTAAAACA ACTCAATGTA TTTACGGCAA TTGCTCAAGA AAAAACAATG
ACGAAAGCGG CTGAGCGACT GTTTATTACA AAACCTGCGG TGAGCCTTTC ATTGTCTGAA
CTTGAAAAGA ATTTGGGTTA CAAAGTATTT GATCGCGTAA ATAATCGCTT AGTGTTAAAT
AGTGAAGGCC GCCAACTCCT TCCTTTAGCG GATGAATTAC TAGAACGAGC TGAAGCTATC
GAGCATCAAT TCACTGCTGA TAGTCAGTTG ACTGGTTCAT TAAACATTGG TGCCAGTGAT
ACGATTGGTA ATCATATCGC ACCAGTTTTA CTGAGTAAAT TCCAACAACA ACACCCTTGT
GATATTCAAC AGTTATTTAT TTCAAATACC GCTCAAATCA TTAATCGACT GTTGGAATTC
AAACTCGATA TTGGCTTAGT TGAAGGGAAA GCACATCACC CCAAGCTAAA CATGATTGAA
TGGCAACAGG ATGACATGTA CATAGTATGC GCCCCTTCTC ACCCGTTAGC TATGCAGAAC
ATAATTACAT TAGAAGACTT AGAACACTCA ACTTGGTTAT TAAGAGAAGA AGGATCTGGT
AGCCGGGAGT ATTTCCTTAA TCATATTGCA TCCAATTTAA ATGATTGGCA TGAGTCCTTA
CAGCTTCACA CCACCGAAGC CATTATTAAT TGCTGCTCTG AAAATATGGG GCTCGCATGT
TTATCTCAAT TAGCCGCTCA AAATTCGATT AATGATGGAC GGTTAGTTCA GCTTCCTTAT
GAAAAGAAAT TGACTCGTCC TTATTGGTTA TTGGTTCATA AAGAAAAATA TCAAACGCCA
TTATTGCAGT ATTTTATGAC TTTTATTCAA CGTTAA
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| Protein sequence | MRISLKQLNV FTAIAQEKTM TKAAERLFIT KPAVSLSLSE LEKNLGYKVF DRVNNRLVLN
SEGRQLLPLA DELLERAEAI EHQFTADSQL TGSLNIGASD TIGNHIAPVL LSKFQQQHPC
DIQQLFISNT AQIINRLLEF KLDIGLVEGK AHHPKLNMIE WQQDDMYIVC APSHPLAMQN
IITLEDLEHS TWLLREEGSG SREYFLNHIA SNLNDWHESL QLHTTEAIIN CCSENMGLAC
LSQLAAQNSI NDGRLVQLPY EKKLTRPYWL LVHKEKYQTP LLQYFMTFIQ R
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