Gene VSAL_I0666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0666 
SymbolclpB 
ID6986590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp738205 
End bp740790 
Gene Length2586 bp 
Protein Length861 aa 
Translation table11 
GC content37% 
IMG OID643379060 
Productchaperone ClpB (heat-shock protein) 
Protein accessionYP_002262184 
Protein GI209694256 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR03346] ATP-dependent chaperone ClpB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00205546 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTAG ACCGATTTAC CAGTAAATTC CAAATCGCCA TTTCAGATGC TCAATCATTA 
GCATTAGGTC AAGATCATCA ATATATTGAG CCGACTCATT TAATGGTGGC TTTACTAAAT
CAAAACGGTA GCACGATAAG ACCATTATTG ACGTTACTTA ATGTTGATGT TACCCAATTA
CGCTCAAAAT TAACGGAAAT TTTAGATAAA GCCCCAAAAG TAATTGGTAT CGGTGGTGAT
GTTCAACTTT CATCAAATAT GGGGGTTATT TTTAATTTGT GTGACAAAAT TGCACAAAAA
AGAAAAGACA CTTATATCTC TTCTGAAATA TTCATGCTTG CCGCGATTGA AGACAAAGGC
CCATTAGGTC ATTTATTAAA AGAGTCAGGT CTTACCGAAG CTAAAATTTC AAAATCTATT
GATGAGATCC GTGGTGGTGA GAAAGTAAAT GATCCTAATG CTGAAGAAAA ACGTCAGGCA
TTAGAGAAGT TTACTATCGA TTTAACTGAG CAAGCTGAGC AAGGTAAATT AGATCCTGTT
ATTGGGCGAG ATGATGAAAT TCGACGAACA ATTCAAGTGC TACAACGAAG AACTAAGAAT
AACCCTGTAA TTATAGGTCA ACCCGGTGTA GGTAAAACGG CGATTGTTGA AGGATTAGCT
CAACGAATTA TTAATGGCGA AGTACCCGAA GGGTTAAAGC ATAAAAGAGT TCTTTCGTTA
GATATTGGGT CTTTAATTGC AGGAGCTAAA TTTCGAGGTG AATTCGAAGA GCGTTTAAAA
GCCGTATTAA ATGAATTAGC AAAAGAAGAA GGTAATATTA TTCTTTTTAT AGATGAAGTT
CATACGATGG TTGGTGCTGG TAAAGGTGAA GGGTCGATGG ATGCCGGGAA TATGCTAAAG
CCGGCGTTAG CTCGAGGAGA CTTACATTGT GTTGGAGCGA CAACGTTAGA TGAATACCGT
AAATATATAG AAAAAGATCC TGCATTAGAA CGACGCTTTC AAAAAGTTAT TGTTGATGAG
CCAACGGTAG AAGATACGAT CGCTATATTA CGTGGCTTGA AAGAACGCTA TGAGATACAT
CATCATGTCG AAATTACCGA TCCAGCAATA GTTGCTGCTG CGACATTATC ACATCGATAT
ATTTCAGATA GACAGTTACC AGATAAAGCG ATTGATTTAA TCGATGAAGC GGCATCTAGT
ATTCGTATGG AAATCGATTC TAAACCAGAA TCATTAGATA AACTTGAACG TAAGATCATT
CAATTAAAAA TAGAACAACA AGCTTTAGTT AAAGAAAGTG ATGATGCGAG TTTAAAGCGT
TTAGACTCTT TAAATTTAGA ATTAAGAGAA AAAGAAAGAG ATTACTCTGA ATTAGAAGAA
ATTTGGAAAG CTGAAAAAGC AGCACTTTCT GGAACTCAAC ATATAAAAAC AGAGTTGGAC
ATCGCAAGAA GTAATATGGA TATCGCTCGT AGAGCCGGTG ATTTGAATCG TATGTCTGAA
TTACAATATG GCCGAATTCC TGAATTAGAA AAACAATTGG ATTTAGCTGC CCAAGCTGAA
ATGCAAGAAA TGAGTTTGCT TAAGAATAAG GTAACAGACG CTGAAATAGC TGAAGTTCTT
TCCCGTCAAA CTGGAATACC AGTTAATAAA ATGTTGGAAG GAGAAAGAGA TAAGCTATTA
AAGATGGAAG CCATGTTGCA CCATCGAGTT ATCGGTCAAG ATGAAGCGGT TGAAGCGGTA
TCAAATGCGA TTCGTCGTAG TCGAGCTGGT TTATCGGATC CTAATCGTCC TATTGGATCT
TTTTTATTCT TGGGTCCTAC GGGGGTGGGG AAAACCGAAT TATGTAAATC ATTAGCAAAT
TTTATGTTTG ATAGTGAAGA CGCAATGGTC CGAATTGATA TGTCGGAGTT TATGGAGAAG
CATTCTGTTG CTCGATTAGT TGGCGCACCT CCTGGCTATG TAGGTTATGA AGAGGGGGGG
TATTTAACTG AAGCCGTAAG GCGTAAGCCA TATTCAGTTT TACTTTTAGA TGAAGTTGAA
AAGGCTCATC CAGATGTATT TAATATATTA TTACAAGTAT TAGATGATGG GCGTTTAACT
GATGGTCAAG GACGTACTGT CGATTTTAAA AATACAGTAA TAATTATGAC ATCAAATTTA
GGTTCAGAAA AAATACAACA GCATTTTGGT GAACTCGATT ATGGCGGTAT AAAAGAACTT
GTCATGGATG TAGTTGGTCA ACATTTTAGA CCTGAATTTT TAAATAGAGT TGATGAAGCG
GTTGTTTTCC ATCCATTGGG ACAGGAGAAC ATTAAAAGTA TTGCCAAAAT ACAATTGCAA
CGTTTAGAAA AACGACTGAA TGAAAAAGAT TATCAGTTAA AAGTGAGTAA TGAAGCGTTA
ACGTTAATAT CGGAAGCTGG TTTTGATCCT GTATATGGTG CAAGACCATT AAAAAGAGCG
ATTCAAACTT ATATTGAAAA TCCGCTAGCA CAAGATATTT TAAGCGGTAA GTTAAGGACA
GGGGAAGAAA TAAAACTAAA AGTAAGAAAT GGTCAGCTGA TTGCTACTCA AAATGATGAT
TTTTGA
 
Protein sequence
MRLDRFTSKF QIAISDAQSL ALGQDHQYIE PTHLMVALLN QNGSTIRPLL TLLNVDVTQL 
RSKLTEILDK APKVIGIGGD VQLSSNMGVI FNLCDKIAQK RKDTYISSEI FMLAAIEDKG
PLGHLLKESG LTEAKISKSI DEIRGGEKVN DPNAEEKRQA LEKFTIDLTE QAEQGKLDPV
IGRDDEIRRT IQVLQRRTKN NPVIIGQPGV GKTAIVEGLA QRIINGEVPE GLKHKRVLSL
DIGSLIAGAK FRGEFEERLK AVLNELAKEE GNIILFIDEV HTMVGAGKGE GSMDAGNMLK
PALARGDLHC VGATTLDEYR KYIEKDPALE RRFQKVIVDE PTVEDTIAIL RGLKERYEIH
HHVEITDPAI VAAATLSHRY ISDRQLPDKA IDLIDEAASS IRMEIDSKPE SLDKLERKII
QLKIEQQALV KESDDASLKR LDSLNLELRE KERDYSELEE IWKAEKAALS GTQHIKTELD
IARSNMDIAR RAGDLNRMSE LQYGRIPELE KQLDLAAQAE MQEMSLLKNK VTDAEIAEVL
SRQTGIPVNK MLEGERDKLL KMEAMLHHRV IGQDEAVEAV SNAIRRSRAG LSDPNRPIGS
FLFLGPTGVG KTELCKSLAN FMFDSEDAMV RIDMSEFMEK HSVARLVGAP PGYVGYEEGG
YLTEAVRRKP YSVLLLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFK NTVIIMTSNL
GSEKIQQHFG ELDYGGIKEL VMDVVGQHFR PEFLNRVDEA VVFHPLGQEN IKSIAKIQLQ
RLEKRLNEKD YQLKVSNEAL TLISEAGFDP VYGARPLKRA IQTYIENPLA QDILSGKLRT
GEEIKLKVRN GQLIATQNDD F