Gene VSAL_I0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0642 
Symbol 
ID6986580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp713065 
End bp715917 
Gene Length2853 bp 
Protein Length950 aa 
Translation table11 
GC content39% 
IMG OID643379037 
Productexported pepdidase, putative zinc protease 
Protein accessionYP_002262161 
Protein GI209694233 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TACTTTGTGT ATCGATTGCA TTGGCTTTAG TAGGGTGCAG TAATTCAGAA 
TTTGAAGCAC CAAAAACATC AGATTTACCG CAAGGTGTAA CGCTTGTAGA GCAAGTTTTA
CCCAAAGAAG GCTCAACGGT TATCCCATAC CAAAAATATA CATTAGAAAA TGGGTTAACG
GTTATTTTAA GTCCTGATAG TTCAGATCCT CTTGTTCATG TCGATGTCAC TTACCACGTA
GGATCGGCTC GTGAAGATAT TGGGAAATCT GGTTTTGCAC ACTTTTTTGA ACACATGATG
TTCCAAGGTT CAGAACATGT TGGTGATCAA CAACATTTTA AAATTATCAC AGAAGCCGGT
GGAACACTTA ACGGCACAAC GAATCGTGAT CGTACGAACT ATTTTGAAAC GGTCCCTGCA
AATCAGCTAG AAAAAATGTT GTGGTTAGAA TCCGACAGAA TGGGATTCTT GATTGATGCG
GTATCTCAGA AAAAATTCGA AATACAACGT AGTACGGTTA AGAATGAACG AGGACAGAAT
TACGACAACC GTCCTTATGG CTTGATTTAT GAGCGAATGG GCGAGGCATT ATTTCCACAA
GATCACCCTT ATTCATGGCA GACGATTGGT TATGTTGAAG ATCTTGACCG TGTAGATGTG
AATGATTTGA AAGCATTTTT CTTACGTTGG TATGGCCCAA ATAATGCGGT TATTACCATT
GGTGGTGACC TAGACAGTAA ACAAACATTA GAGTGGGTAA ATAAATACTT TGGTACTATT
CCAAGAGGCC CTGAAGTTGA GAACGCACCA AAACAACCAG TGACGTTAAC GGAAGATCGT
TTCATTACAT TGGAAGATCG AATTCAACAG CCAATGGTTA TGATTGGGTG GCCAACGACG
TATCGAGGTG AAGAAACAGA GGCAAGTCTT GATATGCTTG CGACTTTACT GGGTAATGGT
AAAACGAGTT TAATGTATCA AGAGCTAGTC AAAACAGGTA AAGCGGTCGA TGCCGGCGCC
TTTCATGATT GTGCTGAATT GTCTTGCACC ATGTATGTTT ATGCAATGAC GGACTCTAGT
GATAAAAACG ATTTAGCAAC GGCTTATCAA GAGGTCATGG ATGTTCTGGA TAAATTTGAA
AAAGAGGGAG TATCGCAAGA AGATCTCGCT GAAGTTCAAG GAAGTGCAGA AGCAGGAGCA
ATATTTGGAT TGCAATCAGT TTCAGGAAAA GTCTCTCAAT TAGCATCAAA TGAAACTTTT
TATGGTAATC CTAACCAATT AGAAGCGCAG CTCGCAGAAT TGAAAGCCGT GACTCCTGAT
AAAGTATCGC AAGCATTTGA TACTTACATA GCAAATAAAT ATAAAGTGAC GCTGAGTGTA
GTACCAAAAG GTAAAACACA GCTTCAAGTT AGAAAACCAA ACTTTATTAC TCCTAAACGA
GATCTTCCTG AGTACCAAAA AATTGATGAA AACAGCTTAG ATGTACGTAA AGCCGTCGAT
AATTTTGATC GTTCAGTGAT GCCTCAACCA TCAAAAGCTG TGACAGCAAA AACACCTGAT
ATTTATCGAG CTAAATTAGC CAATGGTATT GAAGTGTTGG GATCGGAAGC AATCGAAACA
CCTACAGTGC AGTTACAAAT ATCAATACCT GCTGGTAACC GCTATGTTTC CCGAGGAAAA
GAAGGGTTAG CATCACTGAC GGCTTCTATG ATGGAAGAAG GTACGGTTAA ATCTAGTTCA
GAAGATATTC AAAAGAGACT GGATAAGTTG GGCAGCAGCA TCTCTTTTAA TTCTGGTAGC
TATACCACTG CGATATCAAT TTCATCATTG ACTAAAAATC TAGATGAAAC GCTTAGTATA
GTGAATGAAA TGCTATTTTC TCCGGCATTT AAACAGTCTG ATTTTGATCG TTTACAGAAG
CAAGCAATCG AAGGTTTAGT TTACGATCAT CAAAAACCAG CATGGTTAGC ATCACAAGCA
ACACGCGAAG TTCTCTTTAA AGGCACCATA TTTGATCGCT CCCCTGATGG AACGATGGAA
TCGGTGAAAA GTTTGACGTT ATCTGATGTT AAGGCGTTCT ATAAGAAACG CTACACTCCG
ATTGGTACTC AAGTTGTGTC GGTTGGTGAT GTGCAAAAAT CAGACTTAAT CTCTAAGCTC
TCTTTTCTAT CTACATGGGA AGGTTCAGCA CCAAGTTTGT TAGCTCCGCA GCAATTACCT
ACGCTAGCGG GACAAAAAAT ATATTTAATT GATAAGCCGA ACGCTCCGCA AAGTGTGGTT
CGTTTTGTTC GCCAAGGCAT TCCATTTGAT GCAACTGGTG AATTGTATCA AACACAACTT
GCTAATTTTA ACTTAGCTGG CAACTTCAAT AGCCGAATCA ATCAGAATTT GCGTGAAGAT
AAAGGCTACA CCTATGGCGC TGGTGGTTAT TTAATGGGGA ATAAAGAAGT CGGCATGGCT
ATCTTTTATG CTCAAGTTCG AGCTGATGTG ACTCTTGAAT CGATCAAAGA ATTTATTTCT
GAAATGGATA AATATAAGAA CGATGGAATG ACAATGGATG AACTAAACTT TATGCGTTTA
GCGGTTGGCC AACAAGATGC ATTGAAATAC GAAACACCAA GCCAAAAAGC GAATCTTCTA
GGTAAAATAT TAACCTATTC ATTAGATGAC GATTTTATTG ATGAGCAAAA TACATTAATT
GCGACATTAG GTAGAGAGGA TTTGAATGCG TTGGCTTCTA AGTGGTTTGA CCCAACTCAA
TATCAAATTA TTGTGGTTGG AGATGCTAAG TCATTAACCC CTAAATTAAA AACGTTAGGT
TTACCAATCG AATCTATCAC GGTGAATAAA TAG
 
Protein sequence
MKKLLCVSIA LALVGCSNSE FEAPKTSDLP QGVTLVEQVL PKEGSTVIPY QKYTLENGLT 
VILSPDSSDP LVHVDVTYHV GSAREDIGKS GFAHFFEHMM FQGSEHVGDQ QHFKIITEAG
GTLNGTTNRD RTNYFETVPA NQLEKMLWLE SDRMGFLIDA VSQKKFEIQR STVKNERGQN
YDNRPYGLIY ERMGEALFPQ DHPYSWQTIG YVEDLDRVDV NDLKAFFLRW YGPNNAVITI
GGDLDSKQTL EWVNKYFGTI PRGPEVENAP KQPVTLTEDR FITLEDRIQQ PMVMIGWPTT
YRGEETEASL DMLATLLGNG KTSLMYQELV KTGKAVDAGA FHDCAELSCT MYVYAMTDSS
DKNDLATAYQ EVMDVLDKFE KEGVSQEDLA EVQGSAEAGA IFGLQSVSGK VSQLASNETF
YGNPNQLEAQ LAELKAVTPD KVSQAFDTYI ANKYKVTLSV VPKGKTQLQV RKPNFITPKR
DLPEYQKIDE NSLDVRKAVD NFDRSVMPQP SKAVTAKTPD IYRAKLANGI EVLGSEAIET
PTVQLQISIP AGNRYVSRGK EGLASLTASM MEEGTVKSSS EDIQKRLDKL GSSISFNSGS
YTTAISISSL TKNLDETLSI VNEMLFSPAF KQSDFDRLQK QAIEGLVYDH QKPAWLASQA
TREVLFKGTI FDRSPDGTME SVKSLTLSDV KAFYKKRYTP IGTQVVSVGD VQKSDLISKL
SFLSTWEGSA PSLLAPQQLP TLAGQKIYLI DKPNAPQSVV RFVRQGIPFD ATGELYQTQL
ANFNLAGNFN SRINQNLRED KGYTYGAGGY LMGNKEVGMA IFYAQVRADV TLESIKEFIS
EMDKYKNDGM TMDELNFMRL AVGQQDALKY ETPSQKANLL GKILTYSLDD DFIDEQNTLI
ATLGREDLNA LASKWFDPTQ YQIIVVGDAK SLTPKLKTLG LPIESITVNK