| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0632 |
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| Symbol | mutS |
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| ID | 6986575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 699029 |
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| End bp | 701596 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379019 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_002262151 |
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| Protein GI | 209694223 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0530533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAATAA AATCAACTGA AAAACACACA CCCATGATGC AACAGTACTT ACGTTTAAAG
TCTGAAAATC CTGACATTCT ACTGTTCTAT CGCATGGGAG ATTTCTACGA GCTTTTCTAT
GATGATGCCA AACGAGCGTC TCAATTACTT GAGATATCTT TAACTAAACG TGGGTCCTCC
GCAGGTGAAC CAATCCCAAT GGCAGGTCTT CCTTATCACG CAGTTGAAGG ATACTTAGCT
AAACTGGTTC AACAAGGTGA GTCAGTTGCG ATTTGTGAAC AAATAGGTGA CCCAGCGACA
AGTAAAGGCC CAGTAGAACG AAAAGTCGTG CGTATTGTGA CCCCAGGAAC AGTGACCGAT
GAGGCGCTTC TTCCTGAGCG TTTTGATAAC CTAATCGCAG CGATTTATCA TCATAAAGGC
CAATTTGGTT ACGCAACATT AGACATCACC TCGGGTCGAT TTAAAGTTTC TGAACCTTCA
ACCGAAGAAT CCATGCTCGC TGAGCTACAA CGAACTTCAC CGACAGAATT GCTATTTAGT
GAAGACTTTG AACCTGTTCA TCTGCTTGAA AAACGTAATG GTAATCGCCG TCGTCCAGTA
TGGGAATTTG AATTAGACAC CGCAAAGCAA CAACTAAACC AACAATTTGG TACTCGTGAT
CTTGTTGGTT TTGGTGTTGA AAATGCAGAA TTTGGTTTAT GTGCCGCAGG TTGTTTAATT
CAATACGTTA AAGATACCCA ACGCACTACC TTGCCACATA TTCGTTCTAT CGTAATGGAT
CGCCAAGACG ATTCGGTGAT CTTAGATGCG GCAACTCGTC GTAACTTAGA AATAACGCAA
AACTTAGCGG GTGGGTTCAA CCACACGTTA TCAGAAGTTC TTGATCATAC TTCAACCGCA
ATGGGTAGTC GTTTATTAAA ACGCTGGTTA CATCAACCGA TAAGAACCCA TGATGTTCTC
AATCAGCGTC TTGATGCGAT CGGAGAGCTA AAAAGCAATG GGTTATATGC CGAACTGTCT
CCTCAATTAA AGCAAATTGG CGATGTAGAA CGCATTCTAG CGCGATTAGC CTTACGTTCG
GCTCGTCCAA GAGATCTGGC TCGTTTACGT AATGCATTAC AGCAATTACC TGAATTAGCA
CAAAGTACTC AAGCATTTGA ACAAACGCAT TTATTAGAAC TTGCGTCACT TGCCCAACCT
ATCGATTCTA TTTGTGAATT ATTGGAACGA GCAGTTAAAG AGAATCCACC CGTCGTTATT
CGTGACGGTG GTGTATTGGC TGATGGTTAT AATGAAGAAT TAGATCAATG GCGAGATCTT
GCTAATGGCG CCGCTCTATT CTTAAGTAAA TTAGAACAAG AAGAGCGTGA ACGTCACGAC
ATTGATACGT TGAAAGTTGG TTATAATAAC GTTCATGGTT TTTATATTCA GATCAGTAAA
GGGCAAAGCC ATAAAGCCCC TGCGCATTAT GTTCGCCGTC AAACATTGAA AAATGCAGAG
CGCTACATCA TTCCAGAGCT TAAAGCCCAT GAAGATAAAG TGCTAAGCTC AAAATCTAAA
GCTTTAGCGA TAGAGAAAAA ATTATGGGAA GAATTGTTCG ATCAACTTCT ACCTCATTTA
GAACAACTCC AATTAATGGC TAACGCGATT TCTGAATTAG ATGTACTCAG TAATCTTGCA
GAACGTGCTG ATACTCTTAA CTACTGTCGT CCAACCTTAT CATCAGACAT TGGAATGAAG
ATTGAAGGCG GTCGCCACCC AGTAGTAGAA CAAGTAATGA GTGACCCTTT CATTGCTAAC
CCTATAAACC TTAATGATGA TCGTAAAATG TTGATCATTA CAGGGCCCAA TATGGGGGGT
AAATCCACCT ACATGCGTCA AACTGCACTC ATTGCGCTAA TGGCTCATGT TGGGTGTTAT
GTGCCTGCCG ATTCTGCACA TATTGGTCTA TTAGATCGAA TATTTACTCG TATTGGTGCT
TCTGATGATT TAGCGTCTGG TCGTTCTACT TTCATGGTCG AGATGACAGA AACCGCAAAC
ATCTTACATA ACGCGACACA ACACAGTTTA GTGCTTATGG ATGAAATTGG CCGTGGTACA
AGCACCTACG ATGGTTTATC CCTTGCATGG GCAAGTGCAG AATGGTTAGC GACAAAAATT
AATGCAATGA CATTATTTGC GACCCATTAC TTCGAGTTAA CTGAGCTGCC AAATTTATTT
AGTGGTTTAG CAAATGTACA TTTAGATGCC GTTGAGCATG GTGATGAAAT TGCCTTCATG
CATGCCGTAC AAGAAGGCGC CGCGAACAAA TCATACGGTT TAGCTGTCGC ATCACTTGCT
GGTGTACCAA AAGCCGTAAT AAAAAAAGCG AAGCAAAAGC TTCAACAACT TGAAAATGGT
CAACCAAAAA ATCAATCGCT AACGAGTACC CAAATAAAAC AAGAGCATCA GCTCTCTCTA
ATTCCAGAGC CTAGTGAAGT AGAAGAAGCG TTAGCAAAAG TAAACCCTGA TGACTTATCT
CCTCGTCAGG CATTAGAGGC GCTTTATCGT TTAAAAGCGC TCTTATAA
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| Protein sequence | MAIKSTEKHT PMMQQYLRLK SENPDILLFY RMGDFYELFY DDAKRASQLL EISLTKRGSS
AGEPIPMAGL PYHAVEGYLA KLVQQGESVA ICEQIGDPAT SKGPVERKVV RIVTPGTVTD
EALLPERFDN LIAAIYHHKG QFGYATLDIT SGRFKVSEPS TEESMLAELQ RTSPTELLFS
EDFEPVHLLE KRNGNRRRPV WEFELDTAKQ QLNQQFGTRD LVGFGVENAE FGLCAAGCLI
QYVKDTQRTT LPHIRSIVMD RQDDSVILDA ATRRNLEITQ NLAGGFNHTL SEVLDHTSTA
MGSRLLKRWL HQPIRTHDVL NQRLDAIGEL KSNGLYAELS PQLKQIGDVE RILARLALRS
ARPRDLARLR NALQQLPELA QSTQAFEQTH LLELASLAQP IDSICELLER AVKENPPVVI
RDGGVLADGY NEELDQWRDL ANGAALFLSK LEQEERERHD IDTLKVGYNN VHGFYIQISK
GQSHKAPAHY VRRQTLKNAE RYIIPELKAH EDKVLSSKSK ALAIEKKLWE ELFDQLLPHL
EQLQLMANAI SELDVLSNLA ERADTLNYCR PTLSSDIGMK IEGGRHPVVE QVMSDPFIAN
PINLNDDRKM LIITGPNMGG KSTYMRQTAL IALMAHVGCY VPADSAHIGL LDRIFTRIGA
SDDLASGRST FMVEMTETAN ILHNATQHSL VLMDEIGRGT STYDGLSLAW ASAEWLATKI
NAMTLFATHY FELTELPNLF SGLANVHLDA VEHGDEIAFM HAVQEGAANK SYGLAVASLA
GVPKAVIKKA KQKLQQLENG QPKNQSLTST QIKQEHQLSL IPEPSEVEEA LAKVNPDDLS
PRQALEALYR LKALL
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