Gene VSAL_I0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0626 
SymbolradA 
ID6986573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp690051 
End bp691430 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content43% 
IMG OID643379013 
ProductDNA repair protein RadA 
Protein accessionYP_002262145 
Protein GI209694217 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1066] Predicted ATP-dependent serine protease 
TIGRFAM ID[TIGR00416] DNA repair protein RadA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.478337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG CAAAACGTGC CTACGTTTGT AACGATTGTG GGGCAGACTT TCCTCGTTGG 
CAAGGACAGT GTAGTGCTTG TGGGGCGTGG AACACGATTA CAGAGGTTCG ATTAGCGGCT
TCTCCTCAAG TGGCTAGAAA CGAACGATTG GTCGGATACT CAGGTTCTGC TACGGATTCT
AAAGTTCAAA CGCTATCAAG TATTGATCTT CAAGAGGTCC CTCGTTTTAG TAGCAGCTTT
AAAGAGTTTG ATCGGGTGCT TGGTGGTGGG ATTGTTCCTG GTGCGGCTAT CTTAATTGGC
GGTAATCCGG GGGCTGGTAA ATCCACACTG CTGTTGCAAA CCATGTGTCG CTTAGCCAGT
GAAATGCCAA CGTTGTATGT AACGGGTGAA GAATCATTAC AACAAGTCGC CATGCGAGCA
TCTCGTCTTG GGCTGCCAAA AGATAATTTG AAAATGTTGT CTGAAACCAG CATTGATAAA
ATTTGTCAGA TCGCAGACAA AGAAAAACCT AAAATAATGG TTATTGACTC GATTCAAGTG
ATGCATGTAG ATGATGTTCA ATCGTCTCCA GGCAGTGTTG CTCAAGTTAG AGAATCAGCA
ACAACACTTA CTCGTTATGC AAAACAAAAT AATGTGTCTA TATTTCTTGT GGGGCATGTA
ACTAAAGATG GTTCGCTTGC AGGACCAAAA GTACTGGAGC ATATTATTGA TTGTTCTGTA
TTACTTGATG GAAGTGCAGA CAGCCGATTT AGAACATTGC GTTGTAATAA AAACCGTTTT
GGTGCCGTAA ATGAATTGGG CGTATTTGCA ATGACGGGGC AAGGATTGAA AGAAGTAAAT
AATCCGTCTG CGATTTTTCT ATCCCGTGGC GAAGAGGAAA CGTCAGGCAG TTCTGTTATG
GTTGTTTGGG AAGGGACACG CCCGTTATTG GTTGAAATTC AAGCATTAGT CGATTATTCC
CAACTATCTA ATCCACGTCG AGTTTCTGTT GGGCTAGATC AAAACCGTTT GTCGATGTTA
CTTGCTGTAC TTCATAAACA TGGTGGTCTG CAAATGGCGG ATCAGGATGT CTTTGTCAAT
GTGGTTGGTG GCGTAAAAGT TGCAGAAACC AGTGCCGATT TAGCATTGAT AATGGCGCTA
TTATCTAGCT TTAAAGATCG TCCATTACCA AAAGATGTGG TTGTTTTTGG TGAAGTAGGG
CTTGCCGGTG AAATCCGTCC AGTTCCTAGT GGTCAAGAGC GTCTTATGGA AGCGTATAAA
CATGGATTTA AACGCGCGAT TGTTCCTGCT GCTAATATGC CGAAAGGGGG GATTGAAGGC
ATGCAAATTC ATGGCGTGAA AAAATTATCA GAGGCAATTG ATGCTTTTGA TGAACTATAA
 
Protein sequence
MAKAKRAYVC NDCGADFPRW QGQCSACGAW NTITEVRLAA SPQVARNERL VGYSGSATDS 
KVQTLSSIDL QEVPRFSSSF KEFDRVLGGG IVPGAAILIG GNPGAGKSTL LLQTMCRLAS
EMPTLYVTGE ESLQQVAMRA SRLGLPKDNL KMLSETSIDK ICQIADKEKP KIMVIDSIQV
MHVDDVQSSP GSVAQVRESA TTLTRYAKQN NVSIFLVGHV TKDGSLAGPK VLEHIIDCSV
LLDGSADSRF RTLRCNKNRF GAVNELGVFA MTGQGLKEVN NPSAIFLSRG EEETSGSSVM
VVWEGTRPLL VEIQALVDYS QLSNPRRVSV GLDQNRLSML LAVLHKHGGL QMADQDVFVN
VVGGVKVAET SADLALIMAL LSSFKDRPLP KDVVVFGEVG LAGEIRPVPS GQERLMEAYK
HGFKRAIVPA ANMPKGGIEG MQIHGVKKLS EAIDAFDEL