| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0619 |
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| Symbol | deoC |
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| ID | 6986572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 681508 |
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| End bp | 682284 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643379007 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_002262139 |
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| Protein GI | 209694211 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT TAAAAGCAGC TGCACTACGT GCATTAAAGT TGATGGATTT AACCACACTA
AACGATAACG ACACAGATGA AGCCGTTATT GCGTTGTGTA AAAATGCGAA GACAGCCGTA
GGCAATACAG CAGCAGTTTG TATCTATCCT CGTTTTGTAC CTATTGCTAA AAAAACGCTA
CGTGAACAGG GGACTCCTGA TGTTCGCATT GCAACGGTAA CTAACTTCCC TCACGGTAAT
GATGATATTG CTATTGCGGT GGCTGAAACG AAAGCTGCGG TTGCTTATGG CGCAGACGAA
GTCGATGTTG TCTTCCCATA CCGTGCATTG ATTGCTGGTA ATGAAACTGT TGGTTTTGAA
CTGGTTAAGC AATGTAAAGA AGCGTGTGGC GATATTCTGC TTAAAGTGAT CATTGAAACT
GGTGAGCTAA AAGAAGAAGC ACTTATTAAG AAAACGTCTC AAATTTGTAT TGAAGCAGGT
GCTAACTTCA TTAAAACCTC TACTGGTAAA GTGCCAGTGA ACGCAACACC AGAATATGCA
CGCATGATGT TAGAAGTTAT TCGTGATATG GGCGTAGCAA AAACAGTGGG TTTCAAACCT
GCTGGCGGCG TTCGTACTGC TGAAGATGCA CAAGCATACC TAGCAATGGC TGATGATATT
CTAGGTGGCG ATTGGGCTGA TAACATGCAC TACCGTTTTG GTGCGTCAAG CCTACTGACT
AATCTTTTAA ATACATTAGA AGTGACAGCA GAAACAGCAG ACCCATCTGC ATACTAG
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| Protein sequence | MSDLKAAALR ALKLMDLTTL NDNDTDEAVI ALCKNAKTAV GNTAAVCIYP RFVPIAKKTL
REQGTPDVRI ATVTNFPHGN DDIAIAVAET KAAVAYGADE VDVVFPYRAL IAGNETVGFE
LVKQCKEACG DILLKVIIET GELKEEALIK KTSQICIEAG ANFIKTSTGK VPVNATPEYA
RMMLEVIRDM GVAKTVGFKP AGGVRTAEDA QAYLAMADDI LGGDWADNMH YRFGASSLLT
NLLNTLEVTA ETADPSAY
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