| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0585 |
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| Symbol | carA |
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| ID | 6988389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 643459 |
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| End bp | 644613 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643378970 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_002262105 |
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| Protein GI | 209694177 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0152244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGTAAAT CAGCGCTATT AGTCCTAGAA GATGGGACAG TGTTCCGCGG TCAATCGATT
GGAGCAGATG GCTCGGCCGT CGGTGAAGTC GTTTTTAATA CCTCGATGAC GGGGTACCAA
GAGATTCTCA CTGATCCTTC CTATTCTCAA CAAATCGTTA CTCTTACTTA TCCTCACATT
GGCAACACCG GAATCAATTC CGAAGATGAA GAATCTTCTT CTATCCACGC TCAAGGCCTT
GTGATTCGCG ATCTTCCTCT CCTAGCTTCA AACTTCCGCA GTGAACAAAC TCTTTCTGAA
TACCTCAAAT CTCAAAATAT TGTCGGCATT GCTGATATCG ATACGCGTAA GCTGACTCGT
ATTTTGCGTG AGAAGGGTGC TCAAAACGGT TGTATCATTG CTTGCTCTTC TAAGAAAGAA
AGCAATTTAG ATGAAGCATT TGCTCTTGCT CAAGCAAAAG CATTCCCGGG TCTTAAAGGA
ATGGATTTAG CGAAGGAAGT TACCACGTCA GAAGCTTACC AGTGGAAACA AGGTTCTTGG
ACTCTTACTG GCGGTTTGCC AGAAGAAAAA GCAGACAGCG AACTACCGTT CCATGTTGTT
GCTTATGATT TTGGTGCTAA ACGTAATATC TTACGTATGT TGGTTGACCG CGGTTGTCGT
CTAACGGTCG TTCCGGCACA AACTTCAGCA GAAGAAGTAT TAGCGATGAA CCCAGATGGT
GTGTTCTTAT CAAACGGTCC TGGTGACCCG GCGCCATGTA CTTACGCTAT TGAAGCAACG
AAAGTGTTCT TAGACAAAGG GTTACCAATC TTTGGTATCT GTCTTGGTCA CCAAATTCTT
GCTCTAGCAT CAGGCGCTCA AACAATTAAG ATGAAGTTTG GCCATCACGG TGCAAACCAC
CCTGTTAAAG ATTTGGATCG TGATGTGGTT ATGATTACTG CACAGAACCA TGGTTTTGCA
GCAGATGAAG AAACACTTCC TGCAAATCTA CGTGCAACGC ACAAATCATT GTTTGATGGC
ACACTTCAAG GCATTCATCG TACAGATAAG CCTGCATTTA GCTTCCAAGG TCACCCTGAA
GCAAGCCCTG GCCCACATGA TGCAGCGCCC TTGTTTAACC ATTTCATTGA ATTGATTCAG
CAGCATAAAG CTTAA
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| Protein sequence | MSKSALLVLE DGTVFRGQSI GADGSAVGEV VFNTSMTGYQ EILTDPSYSQ QIVTLTYPHI
GNTGINSEDE ESSSIHAQGL VIRDLPLLAS NFRSEQTLSE YLKSQNIVGI ADIDTRKLTR
ILREKGAQNG CIIACSSKKE SNLDEAFALA QAKAFPGLKG MDLAKEVTTS EAYQWKQGSW
TLTGGLPEEK ADSELPFHVV AYDFGAKRNI LRMLVDRGCR LTVVPAQTSA EEVLAMNPDG
VFLSNGPGDP APCTYAIEAT KVFLDKGLPI FGICLGHQIL ALASGAQTIK MKFGHHGANH
PVKDLDRDVV MITAQNHGFA ADEETLPANL RATHKSLFDG TLQGIHRTDK PAFSFQGHPE
ASPGPHDAAP LFNHFIELIQ QHKA
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