| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0583 |
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| Symbol | ispH |
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| ID | 6988501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 641077 |
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| End bp | 642021 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643378968 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_002262103 |
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| Protein GI | 209694175 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.10044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAG TATTAGCGAA CCCTCGTGGA TTTTGTGCCG GTGTTGATCG TGCCATCAGT
ATTGTTGAAC GAGCGCTTGA ATTATATAAA GCCCCTATTT ATGTACGTCA TGAAGTGGTT
CATAACCGTT TTGTCGTCGA AGGATTAAAG CAACGCGGTG CTATTTTTGT TGAAGAGTTA
AGTGAAGTTC CTGATGATAA TATCGTGATC TTTTCAGCTC ACGGAGTATC TCAAGCAGTG
CGTACTGAAG CAAAAGAGCG AGCATTAACG GTATTTGATG CCACTTGTCC ATTAGTAACA
AAAGTTCATA TGGAAGTTGC TCGTGCAAGT AAAAAGAGCA TTGAAGTTGT TTTAATTGGT
CACGCTGGTC ACCCTGAAGT TGAAGGGACC ATGGGACAAT ATGCGAGTGA AGCTGGTGGA
ATGTATTTAG TCGAGACACC TGAGGATGTA GAGAAGCTGA TTGTTCAAGA TCCAAATAAC
CTTCATTATG TCAGCCAAAC GACATTATCA GTTGATGAAA CCGCAGATGT TATTGATGAA
TTACGCCGTG TATTTCCAAA GATCCAAGGC CCGCGTAAAG ATGATATCTG TTATGCCACA
CAAAACCGTC AAGATGCAGT GCGAGATATG GCAGGCCAAG TTGATGTGAT GATCGTTGTG
GGGTCTAAAA ATTCATCTAA TTCAAATCGA TTGCGTGAAC TGTCTGAAAA ATTAGGCACA
ACGAGTTATC TGATTGATTG CCCAGAAGAG CTGAAAGAAG AATGGTTAAC AAACCAAGCG
AAAGTTGGTG TTACTGCCGG CGCATCAGCA CCTGAAGAAT TAGTTAACCA AATCATTGAA
CAAGTAAAAG TCTTTGGTGG TACGACTGTG GATGAATTAA AAGGGCGTGA AGAAAACATG
TTTTTTGAAG TACCAAAAGA ATTGCAAATT AAAACTGTGT CTTAA
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| Protein sequence | MKIVLANPRG FCAGVDRAIS IVERALELYK APIYVRHEVV HNRFVVEGLK QRGAIFVEEL
SEVPDDNIVI FSAHGVSQAV RTEAKERALT VFDATCPLVT KVHMEVARAS KKSIEVVLIG
HAGHPEVEGT MGQYASEAGG MYLVETPEDV EKLIVQDPNN LHYVSQTTLS VDETADVIDE
LRRVFPKIQG PRKDDICYAT QNRQDAVRDM AGQVDVMIVV GSKNSSNSNR LRELSEKLGT
TSYLIDCPEE LKEEWLTNQA KVGVTAGASA PEELVNQIIE QVKVFGGTTV DELKGREENM
FFEVPKELQI KTVS
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