Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0559 |
Symbol | |
ID | 6989257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 613065 |
End bp | 613769 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643378945 |
Product | hypothetical protein |
Protein accession | YP_002262080 |
Protein GI | 209694152 |
COG category | [R] General function prediction only |
COG ID | [COG4123] Predicted O-methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.988646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG GCTTCACTTT CAAACAGTTC CATATCAATA TTGGTCTATG CGGAATGCCA GTAAGCACCG ATGGCGTGCT TCTTGGTGCT TGGGCTAATA TTGAACAAAG CAAAAATATT CTAGATATTG GCTGCGGAAC GGGGTTATTA AGCCTTATGA GTGCTCAGAG AAATGAAAAT AGTCATGTTG ATGCGGTAGA GTTAATGCCT CTTGCTGCTG AAGTTGCTTT ACAAAACTTT GTTCAAAGCC CTTGGAAAAA CCGTTTACAC TTAATTCATC AAGATATTCT TCATTATCAC CCCGCTCATT TATATGACGC TATTATTTGC AATCCACCTT ATTTCAATAA TGGTGAGCAA TCACAGAAAG GTGAACGCTC AATTGCCCGC CATACTGATA GCCTACCTTT TGATAAATTA TTAAAATGCT GTAAGGCATT AATGTCCTCT AAAGGACGTG CAAGTTTCAT TCTTCCATTC ATTGAAGGTA ATCAATTCAT TGAAATTGCT AAAAAACACA GTTTTCACCT TACAAAACTA ACAAAAATAC AAACCACAGA AAAAAAAGAT GTTTCTAGAT TATTGATTGA GCTATCAATT TTTCCTTATA TTTATCAAGA GACTACATTA ATAATTCACA GTAAAGATGG TTATAGTAAT GACTTTATTC AGCTCACTAG ACACTTTTAT CTCAATATGG CTTAA
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Protein sequence | MNKGFTFKQF HINIGLCGMP VSTDGVLLGA WANIEQSKNI LDIGCGTGLL SLMSAQRNEN SHVDAVELMP LAAEVALQNF VQSPWKNRLH LIHQDILHYH PAHLYDAIIC NPPYFNNGEQ SQKGERSIAR HTDSLPFDKL LKCCKALMSS KGRASFILPF IEGNQFIEIA KKHSFHLTKL TKIQTTEKKD VSRLLIELSI FPYIYQETTL IIHSKDGYSN DFIQLTRHFY LNMA
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