| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0549 |
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| Symbol | |
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| ID | 6988631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 602012 |
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| End bp | 602743 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643378935 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_002262070 |
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| Protein GI | 209694142 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAC CAAGAATCCA TCATCCAGAA CTACTTCCTT CACAAGGTAA AGTAAACTTA
AGCGATGATG CCGCCAATCA TGTTGGCCGT GTAATGCGAA TGAAAGAAGG CGAAGCTGTA
TTATTATTTG ATGGCAGCGG CGCTGAATTT CCTGCAGTGA TCACTTCTTC ATCAAAGAAA
AGTGTAGAAG TTGAGATCAG TGAACGTATT GATCACAGCA GTGAATCACC ATTAAATTTA
CATTTAGGCC AAGTGGTTTC TCGTGGTGAT AAAATGGAAT TCACCATTCA AAAATCCGTG
GAATTAGGCG TAAATATCAT TACTCCTTTA ATTTCAGAAC GTTGTGGTGT CAAATTAAAC
AAAGAACGTT TTGAAAAGAA ACTCGACCAA TGGCACAAAA TTGCAATAGC CGCTTGTGAG
CAATGTGGAC GTAATACTAT TCCTGAAATT CGTCCAATTA TGTCATTAGA AGAATGGTGT
GCTGAAGAAT ATGAAGGACT CAAATTAAAC CTTCATCCAA GAGCCAAATA TTCGATTAAC
ACCCTACCGG AACCTGTTAC TAATGTTCGT TTGTTGATTG GTCCAGAAGG CGGTTTGTCG
TCTGAAGAAA TTACTATGAC AGAACAATAT CAATTTGAAG AAACGTTGCT TGGTCCTCGG
GTTTTAAGAA CCGAAACCGC AGCACTTACT GCAATTACTG CCTTACAAGT TCGTTTTGGC
GATCTTGGCT AA
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| Protein sequence | MRIPRIHHPE LLPSQGKVNL SDDAANHVGR VMRMKEGEAV LLFDGSGAEF PAVITSSSKK
SVEVEISERI DHSSESPLNL HLGQVVSRGD KMEFTIQKSV ELGVNIITPL ISERCGVKLN
KERFEKKLDQ WHKIAIAACE QCGRNTIPEI RPIMSLEEWC AEEYEGLKLN LHPRAKYSIN
TLPEPVTNVR LLIGPEGGLS SEEITMTEQY QFEETLLGPR VLRTETAALT AITALQVRFG
DLG
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