| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0519 |
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| Symbol | pyrB |
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| ID | 6989054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 573106 |
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| End bp | 574035 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643378897 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_002262040 |
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| Protein GI | 209694112 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAACT CGCTATATCA AAAACATATC ATTTCTATTC CAGAGCTATC TCGCGAAGAG
TTAGAGCTGA TTGTGGAAAC GGCAGGTAAT ATAAAAAAAG AACCTCAACC TGATTTGTTA
AAAAACAAAG TGATTGCGAG CTGCTTTTTT GAAGCATCCA CGCGAACGCG TCTTTCTTTC
GAAACCGCCA TTCAACGCTT AGGTGGATCT GTCATTGGTT TTGATAGTGC AGGAAATACT
TCCCTTGCTC AAAAAGGTGA GACGCTAGCC GATTCAGTTC AAATCATTGC ATCTTATGCT
AATGCTTATG TTATGCGTCA CCCTAGAGAA GGTGCAGCAC GTCTTGCTTC TGAGTTTTCA
AACGGCACCC CGGTAATTAA TGCAGGAGAT GGTGCAAACC AACACCCAAC TCAGACCCTC
TTGGATCTTT ATACTATCTA CGAAACTCAA GGACGCTTAG ATAATCTAAA TATCGCTTTT
GTTGGTGATT TAAAATATGG CCGAACGGTT CACTCTTTAA CTCAAGCATT GGCCAAGTTT
AATGGCGTTA AATTCTTTTT TATTGCTCCA GAAGTATTAG CGATGCCTGA TTACATTTGT
GAAGAGTTAG ATGAACTTGG TATTGAATAC CAACTGCTAA ATAGCATGGA AGAAGCCATT
CCTGAACTCG ATATTCTATA CATGACTCGA GTTCAAAAAG AGCGCTTTGA TGAATCAGAA
TACGCACACA TTAAGTCTGC ATACATCTTA TCTGCTGCGG ATCTAAAACC TGCACGTGAA
AACCTAAAAG TGCTTCACCC TCTTCCTCGT ATTGATGAAA TTAATATCGA CGTCGATAAA
ACACCACACG CGTATTATTT CCAACAAGCT GAAAATGGGG TTTATGCTCG CCAAGCATTA
CTTGCTCTTG TTTTGAATGA ATCACTATAA
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| Protein sequence | MANSLYQKHI ISIPELSREE LELIVETAGN IKKEPQPDLL KNKVIASCFF EASTRTRLSF
ETAIQRLGGS VIGFDSAGNT SLAQKGETLA DSVQIIASYA NAYVMRHPRE GAARLASEFS
NGTPVINAGD GANQHPTQTL LDLYTIYETQ GRLDNLNIAF VGDLKYGRTV HSLTQALAKF
NGVKFFFIAP EVLAMPDYIC EELDELGIEY QLLNSMEEAI PELDILYMTR VQKERFDESE
YAHIKSAYIL SAADLKPARE NLKVLHPLPR IDEINIDVDK TPHAYYFQQA ENGVYARQAL
LALVLNESL
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