| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0503 |
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| Symbol | kdsD |
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| ID | 6988734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 561366 |
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| End bp | 562340 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643378883 |
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| Product | arabinose 5-phosphate isomerase |
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| Protein accession | YP_002262026 |
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| Protein GI | 209694098 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.576158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTC AGTTTGATTT CTGCAAAGCA GGAAAGAATG TTCTTCAAAT TGAAATTGAT
GCACTTACCC AACTGAACAA TTACATCAAT GATGATTTTA CTAAAGCATG TCAATTAATG
CTGGAATGCA AACGTAAAGT CGTTATAATG GGAATGGGGA AATCGGGACA CATAGGCAAA
AAGATAGCAG CTACATTGGC AAGTACCGGT ACTCCCTCTT TCTTTGTGCA TCCAGGCGAA
GCAAGTCATG GCGATTTAGG CATGATAGAA AAAGGGGATG TCATTTTGGC TATATCAAAC
TCAGGAGAAG CGGCCGAAAT ATTAGCGCTT CTGCCTGTCA TTAAACGCCA AGGTATTACG
TTAATTACCA TGACAAGCAA ATCAAGCTCA AGCATGGCAA ACGTGGCAGA TGTAAATCTA
CTCATCACCG TTCCACAAGA AGCATGCCCG CTTGCTTTGG CTCCAACATC TAGCACAACA
GCAACGCTAG TCATGGGGGA TGCATTAGCA ATGGCTCTTT TAGAAGCTCG TGGATTCACC
TCTGATGACT TTGCACTATC TCACCCTGGT GGTGCTCTTG GTCGTAAGCT ATTACTTCAT
CTTGCAGATA TCATGCATAC AGACGATGAA TTACCAATGG TAACGTCAGA CGCATTAATT
AAAACAGCCT TATTAGAAGT CTCAGAAAAA GGCCTCGGTA TGACCGCTAT CGTTGATGAA
GACCAAAAAG TCATTGGTAT CTTTACCGAT GGTGATTTAC GTCGTCTTCT GGATAACCGC
ATTGATATTC ACACACAAAC CATTGGTGAA GTCATGGCTC ATACTCCTTC AGTTGCAAGC
CCTAATTTAT TGGCTGTTGA AGGGCTAAAC CTAATGCAAG ATAAAAAAAT TAATGGCTTA
TTGCTATGCG ATGAAAACAA TCGCTTAGTC GGCGCATTGA ATATGCATGA TCTTCTAAAA
GCAGGAGTAA TGTAA
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| Protein sequence | MATQFDFCKA GKNVLQIEID ALTQLNNYIN DDFTKACQLM LECKRKVVIM GMGKSGHIGK
KIAATLASTG TPSFFVHPGE ASHGDLGMIE KGDVILAISN SGEAAEILAL LPVIKRQGIT
LITMTSKSSS SMANVADVNL LITVPQEACP LALAPTSSTT ATLVMGDALA MALLEARGFT
SDDFALSHPG GALGRKLLLH LADIMHTDDE LPMVTSDALI KTALLEVSEK GLGMTAIVDE
DQKVIGIFTD GDLRRLLDNR IDIHTQTIGE VMAHTPSVAS PNLLAVEGLN LMQDKKINGL
LLCDENNRLV GALNMHDLLK AGVM
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