Gene VSAL_I0461 details

Gene Information

• Locus tag: VSAL_I0461
• Symbol: ssb
• ID: 6989416
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 517928
• End bp: 518479
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643378843
• Product: single-stranded DNA-binding protein
• Protein accession: YP_002261986
• Protein GI: 209694058
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAGCC GTGGTATTAA TAAAGTTATC CTTGTTGGTA ACTTAGGGCA AGATCCTGAA 
ATCCGTTACA TGCCAAGTGG CGGTGCGGTA GCAAACATTA CAATTGCAAC GTCGGAATCA 
TGGCGTGATA AAGCAACTGG CGAACAACGT GAAAAAACAG AATGGCACCG TGTTGCTCTG 
TTTGGTAAAT TAGCGGAAGT TGCTGGTGAG TATTTACGTA AAGGCTCTCA AGTTTATGTT 
GAAGGTCAAT TACAAACACG TAAATGGCAA GATCAGAGCG GTCAAGATCG TTTTACTACA 
GAAGTTGTAG TTCAAGGTTT TAACGGTGTA ATGCAGATGC TTGGTGGTCG TGGTCAAGGT 
CAAGGCGCTC CAGCTGGTGG ACAGCAGCAA CAGCAGCAAG GCAATTGGGG TCAACCTCAA 
CAACCTGCGC AGCAAAATAA CTTTGCTCCA CAACAGCAGC AACAACAAGC ACCTCAACAA 
CAAGCACCGC AGGCAGCTCA GCCTCAATAT AATGAGCCAC CAATGGACTT TGATGATGAT 
ATTCCATTTT AG 

 

Protein sequence

MASRGINKVI LVGNLGQDPE IRYMPSGGAV ANITIATSES WRDKATGEQR EKTEWHRVAL 
FGKLAEVAGE YLRKGSQVYV EGQLQTRKWQ DQSGQDRFTT EVVVQGFNGV MQMLGGRGQG 
QGAPAGGQQQ QQQGNWGQPQ QPAQQNNFAP QQQQQQAPQQ QAPQAAQPQY NEPPMDFDDD 
IPF