| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0447 |
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| Symbol | uvrA |
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| ID | 6986502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 500682 |
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| End bp | 503510 |
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| Gene Length | 2829 bp |
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| Protein Length | 942 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643378831 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_002261974 |
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| Protein GI | 209694046 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA TTGAAGTTAG AGGGGCCAGA ACCCACAACC TAAAAAATAT TAGCTTAACA
CTCCCACGTG ATAAATTAAT TGTGATAACT GGGTTATCTG GGTCAGGTAA ATCTTCTTTG
GCATTTGATA CATTATATGC AGAAGGTCAA CGACGTTATG TTGAGTCATT ATCTGCTTAT
GCCCGTCAAT TTTTATCTCT TATGGAAAAA CCCGATGTAG ACCATATCGA AGGGTTGTCT
CCTGCTATCT CTATCGAACA AAAATCCACA TCTCATAACC CAAGATCTAC CGTGGGTACC
ATTACTGAAA TCTACGATTA TTTGCGTTTA CTATACGCTC GTATTGGTGA ACCCCGCTGC
CCTGAGCATC ATGTCGAACT TACTGCTCAA ACCGTTAGTC AAATGGTAGA TAAAGCCTTA
GAACTGCCGG AAGGCACTAA GCTTATGTTA CTCGCTCCTA TTATTAAGGA GCGTAAAGGC
GAGCATGTTA AAACATTAGA AAATCTAGCA GCACAAGGCT TTATTCGAGC CCGTATTGAT
GGTGAAGTAT GTGATCTTTC CGATCCACCC ACATTAGAGT TACACAAAAA ACACACCATT
GAAGTTGTCG TTGATCGGTT TAAAGTCCGT TCAGATCTTC AACAGCGTTT AGCAGAATCG
TTTGAAACGG CATTAGAACT AACCGGTGGC ATTGCCGTTA TCGACTATAT GGATAAGACC
GATAATGAAC CACTGATCTT TTCGGCTAAT TTTGCTTGCC CACATTGTGG TTATAGCATG
CAAGAACTCG AACCTCGCTT ATTCTCTTTC AATAATCCAG CAGGGGCTTG TGGTACCTGT
GATGGCTTAG GTGTACAACA ATATTTCGAT GCCGATAGAA TCGTTTTAGA TAACAAACTT
AGTATTGCTG AAGGGGCGAT CAAAGGATGG GATCAAAAGA ACTATTACTA CTTCCAAATG
CTAACTTCTC TCGCTGAACA CTATACTTTT GACCTTTTCT CACCCTTTAA ATCATTGTCA
AAAAAAATTC AACAAATCAT CCTTAATGGC TCTGGTAATG AAGAAGTTGA ATTTCATTAC
AGTAATGACC GGGGTGATTT ACGTGTAAAA CGTCACCCAT TTGAAGGTAT TTTAAATACT
TTAGATCGCC GCTATAAAGA AACAGAATCA AGCTCCGTTC GTGATGATTT ATCCAAATAC
ATTTCTACAC AATCTTGCTC TAGTTGCCAT GGGACTCGCC TACGCTTAGA AGCAAGAAGC
GTTTTTGTCG CTGATACCAC GTTATCTGAA ATCTGTGAAA TGAGCATTCA AGATTCGATG
GCATTTTTCA GCTCATTAAC CTTAACAGGA CAAAAAGCAC AAATTGCCGA TAAGATAATG
AAAGAAATAA ACGAGCGCTT AAATTTTCTT ATTAATGTTG GTCTAAATTA CCTTAATTTA
TCGCGCGGTG CGGACACCCT TTCTGGCGGA GAAGCTCAAC GAATACGTCT TGCTAGTCAA
ATTGGCGCAG GGCTTGTAGG TGTTATGTAT GTACTTGATG AACCATCAAT TGGGCTCCAT
CAACGCGACA ATGAACGATT ATTAAAAACG TTGAATCATT TACGTGATCT CGGAAATACG
GTGATTGTCG TTGAGCATGA TGAAGATGCA ATTCGAAGTG CCGATCATAT TATTGATATA
GGCCCTGGAG CCGGTGTTCA TGGTGGATAT ATTGTTGCTG AAGGCGATTA TGCGGCAATC
ATTAATAACC CAGACTCTTT AACAGGCCAA TACTTAAGTG GCGCAAAAAA AATCCCGGTA
CCAAAAGAAC GAGTTAAAGC GGACCCTAAA AAACAAGTAG AACTGATTGG CGCGACTGGT
AATAATTTAA AAAATGTCAC ATTAAAATTA CCGGTTGGTC TCTTTACTTG TATCACTGGT
GTTTCTGGTT CTGGTAAATC GACACTCATT AACGATACTT TTTTCAAGAT TGCACATACT
CAATTAAATG GAGCGACAAC TTCAGAGCCC GCGCCTTATA AAAAAATTAA AGGCATCGAA
CACTTTGATA AAGTCATCGA TATAGATCAA AGTCCAATAG GCCGAACCCC TCGCTCAAAC
CCCGCGACTT ATACTGGTAT TTTTACTCCA ATACGAGAGT TATTCTCTGG AACACCGGAA
TCCCGATCTC GTGGCTATAA ACCTGGACGC TTTAGTTTTA ATGTTCGAGG TGGCCGTTGT
GAAGCTTGCC AAGGTGATGG GGTTATAAAA GTAGAAATGC ATTTCTTACC TGATGTTTAT
GTACCATGTG ATGTGTGTAA GAGTAAACGC TACAACCGTG AAACGCTTGA AGTAAAATAT
AAAGGTAAGA GTATTGATGA AGTTCTTCAG ATGACTATTG AAGATGCTCA TACTTTCTTT
GCTCCTGTTC CCGTGATTGC TCGCAAATTA AAAACACTCA TGGATGTAGG ACTCTCTTAC
ATTCGTTTAG GTCAAGCGGC AACGACTTTG TCTGGAGGGG AGGCTCAACG AGTCAAACTA
GCTCGAGAAT TATCGAAAAG AGATACTGGA AAAACACTCT ATATTTTAGA TGAGCCAACT
ACTGGTTTGC ATTTTCATGA TATTCAACAA CTATTGACTG TGCTTCATCA CTTACGTGAA
CGAGGAAATA CCATTGTGGT TATTGAGCAT AATCTAGATG TAGTAAAAAC AGCTGACTGG
GTGGTAGATT TAGGGCCAGA AGGTGGTAAT GGTGGTGGAG AGATTATTGC AGAAGGAACC
CCCGAAGAAG TTGCACTTGT TGAAGGCTCA CATACGGCAC GCTTCTTAAA ACCAATGCTT
TCCTTATAA
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| Protein sequence | MDKIEVRGAR THNLKNISLT LPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLSLMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LYARIGEPRC
PEHHVELTAQ TVSQMVDKAL ELPEGTKLML LAPIIKERKG EHVKTLENLA AQGFIRARID
GEVCDLSDPP TLELHKKHTI EVVVDRFKVR SDLQQRLAES FETALELTGG IAVIDYMDKT
DNEPLIFSAN FACPHCGYSM QELEPRLFSF NNPAGACGTC DGLGVQQYFD ADRIVLDNKL
SIAEGAIKGW DQKNYYYFQM LTSLAEHYTF DLFSPFKSLS KKIQQIILNG SGNEEVEFHY
SNDRGDLRVK RHPFEGILNT LDRRYKETES SSVRDDLSKY ISTQSCSSCH GTRLRLEARS
VFVADTTLSE ICEMSIQDSM AFFSSLTLTG QKAQIADKIM KEINERLNFL INVGLNYLNL
SRGADTLSGG EAQRIRLASQ IGAGLVGVMY VLDEPSIGLH QRDNERLLKT LNHLRDLGNT
VIVVEHDEDA IRSADHIIDI GPGAGVHGGY IVAEGDYAAI INNPDSLTGQ YLSGAKKIPV
PKERVKADPK KQVELIGATG NNLKNVTLKL PVGLFTCITG VSGSGKSTLI NDTFFKIAHT
QLNGATTSEP APYKKIKGIE HFDKVIDIDQ SPIGRTPRSN PATYTGIFTP IRELFSGTPE
SRSRGYKPGR FSFNVRGGRC EACQGDGVIK VEMHFLPDVY VPCDVCKSKR YNRETLEVKY
KGKSIDEVLQ MTIEDAHTFF APVPVIARKL KTLMDVGLSY IRLGQAATTL SGGEAQRVKL
ARELSKRDTG KTLYILDEPT TGLHFHDIQQ LLTVLHHLRE RGNTIVVIEH NLDVVKTADW
VVDLGPEGGN GGGEIIAEGT PEEVALVEGS HTARFLKPML SL
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