| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0434 |
|---|
| Symbol | |
|---|
| ID | 6986491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 469479 |
|---|
| End bp | 473276 |
|---|
| Gene Length | 3798 bp |
|---|
| Protein Length | 1265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643378810 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002261963 |
|---|
| Protein GI | 209694035 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00651214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCCT TATCGGTAAA TGAAGAACAA AATAAGCCGC AATTAAAGAA AAAGCGTCGT
TTTAGTCGAT ACTGTATTTG CTTGGCTTTG TTTGTTCCAA CAATTATCCT CATGATTTTA
TTGTTAATCG GTGCATTGGT TTTTACAAAC TCTGGCTTGA AGCTAATTAT TTGGGGGGCA
GAAAAAGCGG TACCTGAACT TTCAATAAAA AACATAGACG GAAGTTTAAT TCCGGAATTT
ACTCTATCAG AGGTTAAGTA TCATAATGAT GATCTACTTA ACGCTGATAT TTCTCGTTTT
CATTTTGGGT TAACGGCAAA GTGTTTATTG GTTCCTTCGC TTTGTATTGA TGACATTACG
ATTGACGGGC TTGTTTTGGA TTTCCCTCAA TTACCCACCT CGCCAGAAGA CGAAGCGACT
AAAGCACCTA CAAATAATGA GCTGCTTTCA ATTCCGATCC CTATCAACAT CACCAAGATC
TCGATTAATA ATATAGATGC TACTGTTTTG GGTAATCGTA TTCAGTGGGA TAGTTTTTCT
ACTGGGATTA AAATATATAA GAGTGATTTG ACCATTACAC CTTTGCAATG GAATCGAATT
AATTTACAGC TTGCTGAGAG TGAAAAAGAA AAGACGAAAT CGAAAGCTCC CGCAGATAAA
GTCTCGGATA CCCCAATTGT TTTACCTGAT GTTTATGTTC CATTAAATAT AAAGGTAGAG
CAGTTTTCAC TTCGTGATTT TGTGTTACAG CAGGAAGCGC TAGTTAAAAT CAATCAGCTT
GACTTTAAAG CCAATATTGG TGAGAACGAT ATTAAGGTTA ATGATTTTTA TCTTGATACA
CCACAAGCTA ATTTGTCTTT AGATAATGAA ATATCTTTAC AAGGTGATTA CCCATTAACG
TTAAATGCGA ATGCGGTAAT AAAGGAAACG GAATTAAAAG GTCATAAAGT AACGATTATA
GCCAAAGGGA GTGTTGCAAA CTTAGAGGCA TCTCTTAATT TAACTGGGGG ATTGAAGGCC
AACGTTGAAG CAAATATTCA TCCTCTTGAG ACAACATTAC CTTTTGATGT CCATGTGTAT
AAAACGGAAC TTTATTGGCC GTTATCTGGT GTAAAAGAAT TCAAAGTAAG CGTGCCTAAT
ATAAAAGCAG AAGGTGACCT TAACCAATAC AAGTTTGCGA GTGCTCTATA TATAGAGGGA
AAAACAATAC CGCAAACAGA TTTACGTTTA GAAGGTAAAG GTAATTTAGA AAAAGTTGAG
CTTTATGACT TTATGGCGGA TACCTTAGGG GGAAGTATTT CTGGTAGTGC GGAAGCCGAT
TGGGCTTCTT TAGTTCATTG GAAAGCGGAT GTACATCTTC AGAATATTCA ACCAGGTTTG
CAATGGCCAG AAGCAGAGGG TGACATTAGT GGCGAATTAG TCACCTCAGG CAGTTTAACA
AAAGAAGGGG GTTGGAAGGT TACCGTGCCA ACCATCGATA TTAATGGCAT TTTTAGGGAG
TACCCATTAA TTATAGAAGG GTCGTTAAAA GCGGATGATG TTAAAGGTTT AGGAGAACCG
TATCTCGAGG TTGCACAATT AACACTACAT CATGGGGATA ACGGATTAAC GATTTCGGGT
TCTTTAGATA AAGAATGGGA TCTTAATGTT GATATAGACT TTCCTGAATT ATCTGACAGC
GTACCAGATG TTCATGGGCA GTTAATGGGA AATGTAGCCT TAACCGGAAA AGTAACAGAA
CCTAAAATTA ACGTAGATAT AAATGCGGTA GAACTTCAAC TGCCTCAAAA AACCACACTA
AATAAAGCGT CTATTAAAGG TTACGTTGTT CCTATGCCTG CAATTGATGC GGATCTTAGT
ATTAAATTAC TTGGTGGTAA ATATAAAAAA CAAACACTTA AAGATTTAGT GGTTCGCTTT
AGTGGTAAAG AGCATAATCA CAAATTACAA ATTGATTTAG ATTCTAATGT TATTCAATCG
CATCTTTTAT TTAATGGTTC TCTTGAACGT AAAAAAGGGT GGAAAGGTGA ATTAAGTAAA
GCTGATGTTG TTACTGAAAT TGGTCCATGG AAGTTAGATA AAAAAGCTTC GCTTGCTTAT
GATATCCAAA AGCAAGAGTT ATTCGTTCAA GCTAACTGTT GGAGTCAGGG AAAAACATCG
TTGTGCCTAA ATAAAGATTT AGTCGCTGGA AACTCAGGCA GTGCTGATGT GAGCATTAAA
CATTTTGAAT TCAGTAAAAT TAAAAAATTC TTACCAGAAG AAACAAACAT AAATGGTGAG
GTTAACCTTG ATGCATTAGC GAAATGGGCG GTAGGGAAAC CTCCTTATGT AAAAGCGTCA
TTGTATTTAC CAAAAGGAAA TATAGAGCAA GAGATGGAAA CCCCTCTTAT TGTTGGTTGG
GATAAAGTAA ATGTTAATGC TGAAATGAAA AATGATGAGC TAAAGAGTGA TTGGCTTATT
GCATTAACAA ATAACGGCGA ATTAAAAGGT GAGATGACGG TTAATCAATT AACTGGTTCT
AAAAAACTTA ATGGTTACTC CAATATTAAT ACCGTTTCAT TAGCTATGCT TGAACCTATT
TTAGGAGAGT ATAGTCAATT AGAGGCAATG GTGAATTCGA GTATTAAGGT CTCTGGGCCG
ATAGAACATC CTAAATTATT CGGAGACCTT AGTGTTGATA AAATAAAAGT GAAGGGTGAA
ATATCTCCAG TTGACATAAG TAATGGCAAT ATCAATATTC TTTTTGGTGG CCACAGTGGA
AAATTGACAT CGTTGATCAC TACATCTGAC GGGGATCTAC ATTTAAAAGG GTTTGGTGAT
TGGTCAGCAT TAGACGCTTG GAAAGCAGGA TTGGATGTCT TTGGTAATGA GTTGCAAGTT
AACGTCCCTC CAATGGTGAA GTTAAAAGTT AAACCAGACA TGAAAATTAG AGTAATACCG
ACATTGGCGA AAATTACAGG CTCTATTGAG ATCCCTTGGG GGCGGATAGT CGTGAAGGAT
TTACCAGAAA GTGCAATTGG TGTATCAAAA GATGAAATTA TCTTAGGTGA TAATCTAAAA
CCAATCGAAA GTAACACGTC ATTACCTATG GCAGTGGAAA CCGATATTGA TCTCAGCATT
GGTGATGATG TTTTGCTTTC TGCTTTTGGT TTAGAGGGTG GATTAGTAGG AAAGTTAAAT
ATTACTCAAA AAAATAAAGG TCCGTTTATT TCGGGTGAAA TTAACATTGA AGACGGAACC
TATCGTTCAT TTGGCCAAGA TCTACAAATC ACGAAAGGAA AAATATTATT TAATGGACCC
GCAGATCAAC CTTATGTTGA TATTGAAGCA ATTCGCAATC CAGATAATAC AAAAGATGAT
GTTGTTGCTG GTGTAAAAGT GAATGGACCA GCGGATACAC CTAAAGTTGA AATTTTTTCA
TCACCAAGCA TGCCGCAAGC AAATGCGTTG TCTTATCTAT TGAGAGGGCA GGATATCGAT
AGTGATTCTG GTGGTAATGC CATGACGACC ACACTAATTG GATTAAGTTT AGCAAAAAGT
GGCAAGGTGG TGGGGGAAAT AGGTAAAGCA TTTGGTGTTC AAGATTTACA ACTTGATACT
GCAGGCTCTG GTGGTGATTC ACAAGTGACG ATCAGTGGTT ATATCGCACC AGATTTACAA
GTTAAGTACG GTGTGGGGAT ATTTAATTCT CTTGGTGAGT TTACATTAAG GTATCGTATT
GTCAGCGATC TTTATATAGA AGCGATTTCT GGACTAGATA ATGCGGTAGA CTTAATTTAT
CAGTTTGAAT TTAACTAA
|
|---|
| Protein sequence | MSSLSVNEEQ NKPQLKKKRR FSRYCICLAL FVPTIILMIL LLIGALVFTN SGLKLIIWGA
EKAVPELSIK NIDGSLIPEF TLSEVKYHND DLLNADISRF HFGLTAKCLL VPSLCIDDIT
IDGLVLDFPQ LPTSPEDEAT KAPTNNELLS IPIPINITKI SINNIDATVL GNRIQWDSFS
TGIKIYKSDL TITPLQWNRI NLQLAESEKE KTKSKAPADK VSDTPIVLPD VYVPLNIKVE
QFSLRDFVLQ QEALVKINQL DFKANIGEND IKVNDFYLDT PQANLSLDNE ISLQGDYPLT
LNANAVIKET ELKGHKVTII AKGSVANLEA SLNLTGGLKA NVEANIHPLE TTLPFDVHVY
KTELYWPLSG VKEFKVSVPN IKAEGDLNQY KFASALYIEG KTIPQTDLRL EGKGNLEKVE
LYDFMADTLG GSISGSAEAD WASLVHWKAD VHLQNIQPGL QWPEAEGDIS GELVTSGSLT
KEGGWKVTVP TIDINGIFRE YPLIIEGSLK ADDVKGLGEP YLEVAQLTLH HGDNGLTISG
SLDKEWDLNV DIDFPELSDS VPDVHGQLMG NVALTGKVTE PKINVDINAV ELQLPQKTTL
NKASIKGYVV PMPAIDADLS IKLLGGKYKK QTLKDLVVRF SGKEHNHKLQ IDLDSNVIQS
HLLFNGSLER KKGWKGELSK ADVVTEIGPW KLDKKASLAY DIQKQELFVQ ANCWSQGKTS
LCLNKDLVAG NSGSADVSIK HFEFSKIKKF LPEETNINGE VNLDALAKWA VGKPPYVKAS
LYLPKGNIEQ EMETPLIVGW DKVNVNAEMK NDELKSDWLI ALTNNGELKG EMTVNQLTGS
KKLNGYSNIN TVSLAMLEPI LGEYSQLEAM VNSSIKVSGP IEHPKLFGDL SVDKIKVKGE
ISPVDISNGN INILFGGHSG KLTSLITTSD GDLHLKGFGD WSALDAWKAG LDVFGNELQV
NVPPMVKLKV KPDMKIRVIP TLAKITGSIE IPWGRIVVKD LPESAIGVSK DEIILGDNLK
PIESNTSLPM AVETDIDLSI GDDVLLSAFG LEGGLVGKLN ITQKNKGPFI SGEINIEDGT
YRSFGQDLQI TKGKILFNGP ADQPYVDIEA IRNPDNTKDD VVAGVKVNGP ADTPKVEIFS
SPSMPQANAL SYLLRGQDID SDSGGNAMTT TLIGLSLAKS GKVVGEIGKA FGVQDLQLDT
AGSGGDSQVT ISGYIAPDLQ VKYGVGIFNS LGEFTLRYRI VSDLYIEAIS GLDNAVDLIY
QFEFN
|
|---|
| |