Gene VSAL_I0407 details

Gene Information

• Locus tag: VSAL_I0407
• ID: 6988499
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 445092
• End bp: 445754
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643378783
• Product: opacity-associated protein A
• Protein accession: YP_002261936
• Protein GI: 209694008
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3061] Cell envelope opacity-associated protein A

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000035664
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA AAAAGAAACC GAACATAAAA CGTCCTGACT TTAAGGTTCA GTTGGCTGTT 
GTACAAAAAA AATTAGAACC AATAGCGGCT AGATTTTCTC CATTTTGGGA TCGTTTACCT 
GCTTTTCATC AAAAAGCATT GATGGTTTTA TTGCCTGTTA CATTAGTTTT AGTTTTATTA 
CCAAGTGGTA ACCAAGAGGT TGATTCTGCA ACGGTTGAAA GTATTTCGCC TACGATGATC 
CCTGCGGATG AAATGCAGAG ACAAACCGTG AGTTTAAATT TAGAAGGGTT GAGTGAACAA 
GAAGAGGCGA TTCGTAATGC GCCTTCCCCT TATGAGCTTG AACAAGAAAA ATCGGCAGAA 
GAAATAACAG AAGTAAAAAC GTCTCCACAA GAACGAAGCG CTGAGAAATG GCACGATTAT 
AAAATTAAAG AAGGCGATAC GCTTTACCAA GTGTTTAGAA AAAATAATTT ATCGCTGACT 
GAATTAAATA AAGTATTGAA AGTTGAAGGG GCAGATAAGC CGTTGAGCAA TGTTAAAAAA 
GGCCAACTGT TTCGTTTTAA ACTCAATACT CGAGGGGATT TGGATATCAT TCAAATCGAG 
CGAGAAGGCC AAGCGGTGAT GTATTTTAGA ATGTCTGATG GCAATTTCGG CCGCAGTAAA 
TAA 

 

Protein sequence

MNKKKKPNIK RPDFKVQLAV VQKKLEPIAA RFSPFWDRLP AFHQKALMVL LPVTLVLVLL 
PSGNQEVDSA TVESISPTMI PADEMQRQTV SLNLEGLSEQ EEAIRNAPSP YELEQEKSAE 
EITEVKTSPQ ERSAEKWHDY KIKEGDTLYQ VFRKNNLSLT ELNKVLKVEG ADKPLSNVKK 
GQLFRFKLNT RGDLDIIQIE REGQAVMYFR MSDGNFGRSK