| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0385 |
|---|
| Symbol | pgi |
|---|
| ID | 6986454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 425233 |
|---|
| End bp | 426885 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643378762 |
|---|
| Product | glucose-6-phosphate isomerase |
|---|
| Protein accession | YP_002261915 |
|---|
| Protein GI | 209693987 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0166] Glucose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0412831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA ACATCAACCC AACAGAAACT CAAGCTTGGG CAGATTTGAC TGCACATTTT
GAAACCGCGC AAAACTTCAA TTTAGCGGAT TTGTTTTCTG CTGATGCTCA ACGTTTTGAT
AAATTTTCAA CAACGTTTGG CCAAGATATC TTAGTTGATT TCTCTAAAAA TTTAGTGACA
GAAGAAACGA TGCAAAAGCT ATTTTCTTTA GCTGAGCAAA CTGAATTATC AGAAGCAATC
AAAGCGATGT TCAGTGGTGA AAAAATCAAT AAGACTGAAG ATCGTTCAGT GCTTCATACG
GCACTTCGTA ACCGCAGTAA TACGCCAGTT ATCGTTGATG GCGAAGACGT TATGCCTGCT
GTAAATGCAG TGCTAGAAAA AATGAAAGCG TTCACTGAGC GTTTAATTTC TGGTGAGTGG
AAAGGTTACA CAGGCAAAGA AATTACGGAT ATCGTAAACA TTGGTATCGG TGGTTCAGAT
CTTGGCCCTT ACATGGTGTC AGAAGCATTA GCACCATACA AAACACGCTT AAACATGCAC
TTTGTTTCAA ACGTCGATGG CACACACATT GTTGAAACAT TGAAGCCATT AAATCCAGAA
ACAACGTTGT TCTTAATCGC ATCGAAAACA TTCACGACTC AAGAAACAAT GACAAATGCA
CACAGTGCTC GTGATTGGTT CTTAGCAGAA GCTGGCGATC AAGCACATGT AGCGAAACAC
TTCGCTGCAC TTTCAACAAA CGCAGAATCA GTGTCTGAGT TTGGTATTGA TACCGATAAC
ATGTTTGAGT TCTGGGATTG GGTTGGCGGT CGTTATTCTT TATGGTCAGC GATTGGTCTT
TCAATTGCTT TAGCGGTTGG TTTTGATAAT TTTGTTGAGC TTCTTGAAGG CGCTCACGAA
GTGGATAATC ATTTCGCAAA TACAGAACTT GAAAATAACG TACCAGTAAT CTTGGCATTG
ATTGGCCTAT GGTATAACAA CTTCCATGGT TCTGAATCAG AATCGATTCT GCCATACGAT
CAATACCTAC ACCGTTTTGC TGCGTATTTC CAACAAGGTA ATATGGAATC AAACGGTAAA
TGTGTTGACC GTAATGGCAA TCCAGTTGAT TACCAAACGG GTCCAATTAT TTGGGGTGAA
CCAGGTACAA ATGGTCAGCA TGCGTTCTAC CAATTGATTC ACCAAGGTAC GAAATTGATC
CCATGTGATT TTATTGCTCC TGCAATCAGT CATAACCAAG TGGGCGATCA TCATCAAAAA
CTGATGTCTA ACTTCTTTGC ACAAACAGAA GCATTGGCGT TTGGTAAAAA AGAAGAAACA
GTAAGAGCAG AGTTTGCAGC GGCAGGTAAA ACTGAAGCAG AAATGGCAGA GTTGGTGGCA
TTTAAAGTCT TTGAAGGTAA CCGCCCAACT AACTCAATCT TAGTGAAAAA AGTGACACCT
AAAACATTAG GCAACTTGAT TGCTATGTAC GAACATAAAA TCTTCGTACA GGGTGTGATT
TGGAATATCT TCAGTTTTGA CCAATGGGGT GTAGAACTTG GTAAGCAATT GGCTAACCAA
ATTCTTCCTG AATTGGCTGA TGATAAAGCG ATTAACTCGC ATGACAGTTC AACGAATGGC
TTAATTAACG CATTTAAAGC GTTTAAAGCA TAA
|
|---|
| Protein sequence | MLKNINPTET QAWADLTAHF ETAQNFNLAD LFSADAQRFD KFSTTFGQDI LVDFSKNLVT
EETMQKLFSL AEQTELSEAI KAMFSGEKIN KTEDRSVLHT ALRNRSNTPV IVDGEDVMPA
VNAVLEKMKA FTERLISGEW KGYTGKEITD IVNIGIGGSD LGPYMVSEAL APYKTRLNMH
FVSNVDGTHI VETLKPLNPE TTLFLIASKT FTTQETMTNA HSARDWFLAE AGDQAHVAKH
FAALSTNAES VSEFGIDTDN MFEFWDWVGG RYSLWSAIGL SIALAVGFDN FVELLEGAHE
VDNHFANTEL ENNVPVILAL IGLWYNNFHG SESESILPYD QYLHRFAAYF QQGNMESNGK
CVDRNGNPVD YQTGPIIWGE PGTNGQHAFY QLIHQGTKLI PCDFIAPAIS HNQVGDHHQK
LMSNFFAQTE ALAFGKKEET VRAEFAAAGK TEAEMAELVA FKVFEGNRPT NSILVKKVTP
KTLGNLIAMY EHKIFVQGVI WNIFSFDQWG VELGKQLANQ ILPELADDKA INSHDSSTNG
LINAFKAFKA
|
|---|
| |