Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0375 |
Symbol | leuC |
ID | 6988746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 410418 |
End bp | 411833 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643378753 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_002261906 |
Protein GI | 209693978 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAACG CAAAAACATT ATACGAAAAA GTTTATGATG CCCATGTTGC AGTTGCTGCA AAAGGTGAAA CCCCAATTTT ATATATCGAC CGCCATTTAG TTCATGAAGT GACCTCACCA CAAGCGTTTG ATGGTCTGCG TGAAAAAGGT CGTAACGTTC GCCAAGTCGG TAAAACTTTC GCGACGATGG ATCACAACGT ATCAACACAA ACCAAAGACA TTAATGCCTC TGGTGAAATG GCTCGAATCC AAATGGAAAC ACTGTCTAAA AACTGTGAAG AATTTGGCGT AACCCTTTAC GATCTAAACC ATAAATACCA AGGTATTGTG CACGTAATGG GACCAGAGCT AGGTATTACA CTTCCAGGTA TGACGATTGT GTGTGGAGAT TCACACACCG CAACGCACGG CGCATTTGGT TCTCTTGCAT TTGGTATTGG TACCTCTGAA GTTGAACACG TATTAGCGAC ACAAACGCTA AAGCAAGCTC GTGCAAAAAC GATGAAGATC GAAGTTAAGG GAAAAGTCAC AGAAGGCATT ACCGCAAAAG ACATCGTTCT AGCGATCATT GGTAAAACAA CCGCAGCTGG CGGTACTGGT TATGTGGTTG AATTCTGTGG TGAGGCAATT ACAGATCTGA CGATGGAAGG TCGCATGACG GTATGTAATA TGGCGATAGA GCTAGGTGCC AAAGCCGGCC TAATCGCACC AGATGCCACC ACGTTTGACT ACATTACTGG TCGTAAATTC TCACCTCAAG GTGAAGATTT GACGGCAGCT ATCGAATATT GGTCGTCACT AAAAACGGAT GATGATGCAA AGTTTGATGC CGTTGTTAGC CTTGATGCCT CTGAAATTAA ACCACAAGTG ACGTGGGGAA CAAACCCTGG CCAAGTTATT GCCATTGATC AACCCATTCC TGCACCAGAG AGTTTTTCTG ACCCGGTAGA AAAAGTATCC GCAGAAAAAG CCTTGGCTTA TATGGGTCTT GAAGCCGGTA AATCATTAAC AGATTACAAC GTAGACAAAG TGTTTGTCGG CTCTTGTACC AACTCTCGTA TTGAAGATAT CCGCGCTGCT GCTGCTGTTG CTAAAGGCAA CAAAGTCGCC GCTCATGTTC AAGCCTTGAT TGTTCCAGGT TCTGAGCAAG TAAAAGCACA AGCGGAAAAA GAAGGATTAG ACATCATCTT TAAAGAAGCG GGTTTTGAGT GGCGTTTACC GGGTTGCTCT ATGTGTCTTG CAATGAACAA TGACCGTTTA GGTCCACAAG AACGTTGCGC ATCAACATCA AACCGTAACT TTGAAGGTCG CCAAGGCCGT GATGGACGAA CTCACCTAGT AAGCCCAGCC ATGGCAGCGG CAGCCGCGAT TGCGGGTCAT TTTGTTGATA TTCGTACCAT CACAGAAAAA GCATAA
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Protein sequence | MSNAKTLYEK VYDAHVAVAA KGETPILYID RHLVHEVTSP QAFDGLREKG RNVRQVGKTF ATMDHNVSTQ TKDINASGEM ARIQMETLSK NCEEFGVTLY DLNHKYQGIV HVMGPELGIT LPGMTIVCGD SHTATHGAFG SLAFGIGTSE VEHVLATQTL KQARAKTMKI EVKGKVTEGI TAKDIVLAII GKTTAAGGTG YVVEFCGEAI TDLTMEGRMT VCNMAIELGA KAGLIAPDAT TFDYITGRKF SPQGEDLTAA IEYWSSLKTD DDAKFDAVVS LDASEIKPQV TWGTNPGQVI AIDQPIPAPE SFSDPVEKVS AEKALAYMGL EAGKSLTDYN VDKVFVGSCT NSRIEDIRAA AAVAKGNKVA AHVQALIVPG SEQVKAQAEK EGLDIIFKEA GFEWRLPGCS MCLAMNNDRL GPQERCASTS NRNFEGRQGR DGRTHLVSPA MAAAAAIAGH FVDIRTITEK A
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