| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0368 |
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| Symbol | ksgA |
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| ID | 6988241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 402206 |
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| End bp | 403039 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643378746 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_002261899 |
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| Protein GI | 209693971 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.36865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAA GAAATGATGT CCATTTAGGC CATAAAGCGA AGAAACGCTT TGGTCAAAAC
TTCTTAAACG ACCCTTACGT AATCGATGGA ATCGTATCTG CAATCAACCC TCTGCCAGGT
CAAAACCTTG TAGAAATTGG TCCAGGTCTT GGAGCAATCA CTGAGCCTGT TGGCCGTGAA
ATAGACAAAT TTACCGTTAT CGAACTTGAC CGTGATTTAG CCGCTCGTTT ACGTACTCAC
CCTGAATTGG GCAGTAAATT AACTATTTAT GAAGGCGATG CAATGCGCTT CGACTTCACG
CAGCTTATTC AAGAAGGCAA TAAATTACGT ATTTTTGGTA ACTTGCCATA TAACATCTCT
ACACCATTAA TGTTCCACCT TTTTGAATTT CATAAAGACA TACAAGATAT GCACTTTATG
TTACAAAAAG AAGTGGTTAA CCGCCTAGCG GCAGGTCCAG GAACTAAAGC TTATGGCCGC
CTAACAGTAA TGGCTCAGTA TTACTGTAAG GTAATGCCTG TACTTGAAGT GCCACCAACA
GCGTTTGTTC CGCCACCGAA GGTTGATTCT GCCGTCGTTC GTCTAGTGCC TTATGAGGTA
CTTCCGTTCC CTGCGAAGAA CTTAAAATGG CTTGACCGCG TATGTCGCGA AGGCTTCAAC
CAACGCCGCA AAACAGTACG AAACTGTTTC AAAGCACTAT TAACAAAAGA ACAATTGGAA
GCATTAGGTG TTAATCCTTC CCATCGTCCT GAAAACTTAA CGTTAGAGCA GTTTGTTATC
ATGGCAAACT GGTTGAATGA CAACTACCAA GCAGAATCTA CAGAATCGGC TTAA
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| Protein sequence | MSTRNDVHLG HKAKKRFGQN FLNDPYVIDG IVSAINPLPG QNLVEIGPGL GAITEPVGRE
IDKFTVIELD RDLAARLRTH PELGSKLTIY EGDAMRFDFT QLIQEGNKLR IFGNLPYNIS
TPLMFHLFEF HKDIQDMHFM LQKEVVNRLA AGPGTKAYGR LTVMAQYYCK VMPVLEVPPT
AFVPPPKVDS AVVRLVPYEV LPFPAKNLKW LDRVCREGFN QRRKTVRNCF KALLTKEQLE
ALGVNPSHRP ENLTLEQFVI MANWLNDNYQ AESTESA
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