Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0365 |
Symbol | |
ID | 6986447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 399999 |
End bp | 400490 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643378743 |
Product | membrane protein |
Protein accession | YP_002261896 |
Protein GI | 209693968 |
COG category | [S] Function unknown |
COG ID | [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATG TAACTATGCA GTCTATTTTT GAATTATTCC TCGCCTTATT GAATGACATG TTTTTTGCAA TGATCCCCGC GATCGGTTTT GCTTTAGTTT TTAATGTGCC AGTGAAAGCA TTAAAATATT GTGCGATTGG TGGTGCCATT GGGCATGGAA CTCGATTTTT ATTAATGCAT TATGGCGCAC CATTAGAGTG GGCTACATTA TGTGCAGCAA CAGTGGTGGG TATGATCGGT GTTCATTGGT CACATCGTTT TTTAGCTCAC CCTAAAGTTT TTACTGTCGC GGCATTAATT CCAATGATCC CGGGTGTTTT TGCTTTTAAG GCGATGATTG CGGTTGTTGA GATAAATCAC TTAGGATACT CTCCTGAATT GTGGGCTCTG ATGATCGATA ATTTAATTAA AACCTTATTT ACGATTGCAG CACTCGCGAT TGGGTTAGCG ATGCCTGGTT TGCTGTTTTA CCGTAGAAAA TCTATAGTGT GA
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Protein sequence | MDNVTMQSIF ELFLALLNDM FFAMIPAIGF ALVFNVPVKA LKYCAIGGAI GHGTRFLLMH YGAPLEWATL CAATVVGMIG VHWSHRFLAH PKVFTVAALI PMIPGVFAFK AMIAVVEINH LGYSPELWAL MIDNLIKTLF TIAALAIGLA MPGLLFYRRK SIV
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