| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0361 |
|---|
| Symbol | rplU |
|---|
| ID | 6988724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 397065 |
|---|
| End bp | 397376 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643378739 |
|---|
| Product | 50S ribosomal protein L21 |
|---|
| Protein accession | YP_002261892 |
|---|
| Protein GI | 209693964 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0261] Ribosomal protein L21 |
|---|
| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000287252 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCTG TTTTCCAATC TGGTGGTAAA CAACACCGTG TAAGTGAAGG TCAAACTCTT
CGCTTGGAAA AATTAGACGT TGAGACTGGC GCAACAGTTG ATTTCGACAA CGTTCTTATG
ATTGCTAACG GTGAAGAAAT CACTGTTGGT GCACCTCTAG TAGCTGGCGG TAAAGTAACT
GCGGAAGTAG TTCAGCACGG TCGTGGCGAT AAAGTTAAAA TCGTTAAGTT CCGTCGTCGT
AAGCATTCTC GTAAGCAACA GGGCCATCGT CAATGGTTCA CTGAAGTCAG AATCACTGGC
ATCAGCGCTT AA
|
|---|
| Protein sequence | MYAVFQSGGK QHRVSEGQTL RLEKLDVETG ATVDFDNVLM IANGEEITVG APLVAGGKVT
AEVVQHGRGD KVKIVKFRRR KHSRKQQGHR QWFTEVRITG ISA
|
|---|
| |