Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0340 |
Symbol | secY |
ID | 6989158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 372740 |
End bp | 374071 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643378717 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_002261872 |
Protein GI | 209693944 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00542322 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA AACCAGGAAA AGAAGTAAAT AGTGCTCAGA GCGGCTTAGC TGAACTGAAA TCGCGTCTCT TATTTGTGAT AGGTGCGCTT TTAGTGTTCC GTGCGGGCTC ATTTGTGCCA ATTCCTGGGA TTGACGCTGC TGTCCTTGCT GATCTTTTCG AACAGCAGCA GGGTACCATC ATTGAAATGT TTAACATGTT CTCTGGTGGT GCACTGTCGC GTGCCTCAAT TCTTGCTCTA GGTATTATGC CGTATATTTC GGCATCTATC GTTGTGCAAC TGTTAACAGT TGTACATCCT CCTCTAGCAG AATTGAAAAA AGAAGGTGAG TCTGGTCGTC GTAAGATTAA TCAGTACACA CGTTATGGCA CCTTGGTTCT GGCGACATTC CAAGCAATTG GGATTTCAAC CGGATTGCCA AGCATGATTC CAGGGTTAGT TTCTAACCCT GACATGATGT TCTATCTAAC AGCTACAGTA AGTTTAATTA CCGGTACCAT GTTTTTAATG TGGTTAGGTG AGCAAATTAC TGAACGTGGC ATCGGTAACG GTATATCTTT GATTATTTTC ACAGGTATCG TTGCAGGTTT ACCACCAGCT ATTGGTGAAA CGATCCAGCA GGCGCGTCAA GGTGAACTGC ACGTGCTTCT TCTATTACTA ATTGCAGTGT TATCGTTTGC AGTTATCTAC TTTGTAGTGT TCATGGAGCG TGGTCAACGT CGTATCGTCG TTAACTATGC AAAACGTCAG CAAGGCCGTA AGGTATTTGC AGCTCAAAGT ACTCACTTGC CACTTAAAAT TAATATGGCT GGTGTGATTC CTGCAATATT TGCATCTAGT ATTATACTAT TCCCTGGGAC ATTGGCTCAG TGGTTTGGTG GTAATGGCGA AGGAACATTC GGTTGGTTAA CTGATGTTTC CATGGCGTTA AGCCCTGGTC AGCCATTATA TGTAATGCTT TATGCAGCAG CAATTATCTT CTTCTGTTTC TTCTATACCG CGTTGGTTTT TAACCCGCGT GAAACAGCTG ATAACTTGAA GAAGTCTGGT GCATTCGTAC CCGGAATCCG CCCAGGTGAA CAGACAACGA AATACATAGA TAAAGTGATG ACACGGTTAA CCCTAGCGGG CGCAATGTAT ATTACCTTCA TCTGTCTGAT CCCTGAGTTT ATGATGATTG CATGGAACGT ACGCTTCTAT TTTGGCGGTA CTTCACTACT AATTGTAGTT GTAGTTATTA TGGACTTTAT GGCACAAGTT CAGACTCATC TGATGTCTCA GCAGTATGAG TCCGTTTTGA AGAAAGCTAA TCTGAAAGGC TATGGCCGTT AA
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Protein sequence | MAKKPGKEVN SAQSGLAELK SRLLFVIGAL LVFRAGSFVP IPGIDAAVLA DLFEQQQGTI IEMFNMFSGG ALSRASILAL GIMPYISASI VVQLLTVVHP PLAELKKEGE SGRRKINQYT RYGTLVLATF QAIGISTGLP SMIPGLVSNP DMMFYLTATV SLITGTMFLM WLGEQITERG IGNGISLIIF TGIVAGLPPA IGETIQQARQ GELHVLLLLL IAVLSFAVIY FVVFMERGQR RIVVNYAKRQ QGRKVFAAQS THLPLKINMA GVIPAIFASS IILFPGTLAQ WFGGNGEGTF GWLTDVSMAL SPGQPLYVML YAAAIIFFCF FYTALVFNPR ETADNLKKSG AFVPGIRPGE QTTKYIDKVM TRLTLAGAMY ITFICLIPEF MMIAWNVRFY FGGTSLLIVV VVIMDFMAQV QTHLMSQQYE SVLKKANLKG YGR
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