| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0319 |
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| Symbol | rpsJ |
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| ID | 6986441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 363557 |
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| End bp | 363868 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643378696 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_002261851 |
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| Protein GI | 209693923 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0188597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGAACC AACGTATTCG TATCCGCCTA AAGGCTTTTG ATTATAAACT AATCGACCAG
TCTACAGCGG AGATCGTTGA AACAGCTAAG CGCACTGGCG CTCAGGTTCG TGGTCCTATT
CCACTACCTA CTCGTAAAGA GCGTTTTACT GTTCTTACTT CTCCTCACGT TAACAAAGAC
GCACGTGACC AGTACGAAAT TCGTACTCAC AAGCGTTTAA TCGACATTGT TGAGCCAACA
GATAAAACTG TTGACGCACT AATGCGTTTA GACCTTGCTG CTGGCGTTGA TGTTCAAATT
AGCCTAGGTT AA
|
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| Protein sequence | MQNQRIRIRL KAFDYKLIDQ STAEIVETAK RTGAQVRGPI PLPTRKERFT VLTSPHVNKD
ARDQYEIRTH KRLIDIVEPT DKTVDALMRL DLAAGVDVQI SLG
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