| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0310 |
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| Symbol | rpsL |
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| ID | 6986437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 353778 |
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| End bp | 354152 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643378689 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_002261844 |
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| Protein GI | 209693916 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00417807 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACTA TTAATCAGTT GGTACGCCAG CCACGTGCAA AGCAAGTTGT TAAAAGCAAC
GTGCCTGCGC TAGAAGCGTG TCCACAAAAA CGTGGTGTAT GTACTCGCGT ATATACTACT
ACTCCAAAAA AACCGAACTC AGCGTTACGT AAAGTATGTC GTGTTCGTCT AACTAACGGC
TTTGAAGTTA CTTCATACAT CGGCGGTGAA GGTCACAACC TTCAAGAGCA CTCAGTTGTT
CTTATCCGTG GTGGTCGTGT TAAAGATTTA CCAGGTGTGC GTTACCACAC CGTTCGTGGT
GCACTTGACT GTGCAGGCGT AAACGATCGT AAGAAAGGTC GTTCTAAGTA CGGTGTGAAA
CGTCCTAAGT CTTAA
|
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| Protein sequence | MATINQLVRQ PRAKQVVKSN VPALEACPQK RGVCTRVYTT TPKKPNSALR KVCRVRLTNG
FEVTSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG ALDCAGVNDR KKGRSKYGVK
RPKS
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