Gene VSAL_I0302 details

Gene Information

• Locus tag: VSAL_I0302
• Symbol: slyD
• ID: 6986433
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 348699
• End bp: 349289
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 643378681
• Product: FKBP-type peptidyl-prolyl cis-trans isomerase SlyD
• Protein accession: YP_002261836
• Protein GI: 209693908
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTG AAAAGAATGT TGTAGTTAGC CTTGCTTACC AAGTTAAAAC TGAAGAAGGC 
GTTGTTGTTG ATCAATCAAC AGCTGAAGCA CCTCTTGATT ACTTACACGG CCACGACAAT 
CTGATTGTTG GTCTTGAAAA AGCACTTGAA GGCAAAGTTG CAGGCGATAA GTTCAGCATC 
ACTGTTGCTC CAGAAGAAGC GTACGGCGAG CACATGGATG AGATGATTCA ACGTGTTCCT 
GCTGATGTAT TCCAAGGCGT TGAGCAAATT GAAGTTGGCA TGCGTTTCCT TGCTGACACC 
GATCAAGGTC CAATTCCTGT AGAAGTAACG GAAGTTGATG GCGACGAAGT TGTTGTTGAT 
GGTAACCACA TGCTTGCTGG TCAAACACTA GGCTTTGAAG TTGAAGTGAT TGCGGTTCGT 
GCTGCGACTG AAGAAGAAGC AACTCATGGT CATGTTCATC AAGAAGGTGG CTGTGGTCAC 
GATCACGGAC ACGACCATGA TCATGAAGGC GGTTGTTGTG GTGGCGAAGG CCATTCTCAC 
GAGCACAAAG AAGATCATGA GTGTTGTGGT AGCGGTAACT GCTCTAAGTA A 

 

Protein sequence

MKIEKNVVVS LAYQVKTEEG VVVDQSTAEA PLDYLHGHDN LIVGLEKALE GKVAGDKFSI 
TVAPEEAYGE HMDEMIQRVP ADVFQGVEQI EVGMRFLADT DQGPIPVEVT EVDGDEVVVD 
GNHMLAGQTL GFEVEVIAVR AATEEEATHG HVHQEGGCGH DHGHDHDHEG GCCGGEGHSH 
EHKEDHECCG SGNCSK