| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0277 |
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| Symbol | |
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| ID | 6986417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 324575 |
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| End bp | 327184 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643378658 |
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| Product | polysaccharide export periplasmic protein |
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| Protein accession | YP_002261813 |
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| Protein GI | 209693885 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATGA AAAGAACCCT TACCGCCAGC TTATTTGCGA TGATAAGCAC CAGCACGATG
GCATTTACAC CAAGCGCTGA ACAAATGGCC CAATTTCAGA AACTACCTAA ATCCCAGCAA
GAGCAATTAG CTCGTCAATA TGGGGTAGAT GTTAGTGTAC TTACAGGCAG TGCTTCTCCT
GTACATAGGG CGAAAGGAAA AACAGAACAA CAACCAGTGA GAGCCAGTGC TCCAATAGTA
CCTTCTGTTG CTGATAAAAG TGAACGATTC TCAGCGTTTG GCTACGATAT GTTTTTAGGG
AAAGTGAAGA CACTAACGTC TGTCGATAAC CTACCGGTAC CTAATGATTA TGTCATGGCT
CCCGGTGACG AAGTCGCTAT TCAAATCTAT GGTAAAAGCA GTGAAGAGCT AAACCTGGTT
ATTGATAGAC AAGGGCGTTT AAATTTCCCT GAATTTGGTC CAGTTGCAGT CTCTGGTCAA
ACCTTTGCTG ATATGCAAAA ACACCTAACT GGTATTATTA AACAGAAAAT GTTAGGTGTA
GATGTATTGG TATCAATGGG GGCAATGCGC ACCATGCAAG TGTATGTGGT AGGTGAAGCC
ACACAGCCAG GGGCTTATAA CGTCAATGGC CTAACGACCG TGACCCAAGC ATTGATTGCC
AGTGGTGGAA TTAAAGAATC AGGCAGTCTA CGTTATGTTG AACTTAAGCG TAAAGGCAGA
GTGGTTGAGC GATTTGATGT GTATGACTTA TTGCTAAAAG GCGATTCACG CAGTGATGTT
CGTTTGTTAA GCGGTGATAC CCTGTATATC CCAACTAAAA ACTCAAGTGT TGAGCTACAT
GGTGCAGTAA AACGTCCTGC GATTTATGAA TTAAAAGGCA AAACCACCCT TTCTCGTTTA
CTTTCTTTTG GTGGTGGTTT ACAGCCAAAT GCTTTCCTAT CTAAAATAAA TATTACTCGT
ATGGGATCGA ATGGTTACGA GCAATTTACC GTAGACATGA GTACATCAAA AGGCAAAAAC
TTCATCATTA AAAATGGTGA TAAAGTGGTG ATATCAAAAG CGGCAGAATC ATTAAATAAT
GCAGTTGCAC TGCGTGGAGA AGTCGCAAGA CAAGGCGCGT ATAACTTTAA ACAAGGCATG
AAGGTTAGCG ATATTGTCTC TTCAGTTCGT ACCGATTTAA AACAAAATGC CGATTTAAAT
TACGCGTTAA TTGTACGTGA AATCAATAAG CAACGTGATA TAGAAGTACT GCAATTTAAC
CTAGGCGAAG CCATTGCGAA CCCTAGCTCA AAAGAAAACC TGAGCTTAAA AGAAAGCGAT
CAAATTTTTG TGTTCAATAG TGGATTAGAC CTTGATTATT GGTTTAAGTC TTATGCTGAT
GCTGAAGTGA AAGTGAAACA CAGTGAACAG AAAAAAAATG TAGAAAGAGT AGATGTTGAG
ACAGGGGCAA TTATTGAAAC TCAGTCTGTA ACAACGTTGA AAACAGAAGA TATCGATACC
GTATCAAGAG GTGAACAACA AATACAAAAA AGCCGAGAGA AATTACTAAC CCCAATTATC
GATCGCCTGA AATCACAAGC GACGCTAGAT AACCCTGCAC GGTTAATTGA AGTTAGCGGT
GCCGTTAAGT ACCCAGGTGT TTATCCGTTA TCAAGAATCG GCACCATTAA ACAAATAATT
TTAGCCGCAG GTGGGTTAAC CGAAGAAGCA TACCTAGACA GTGCTGAATG GACGGTTCGT
GATGTGAATG GCAGTGAGTT AATTATCGAG CAGAAGAAGA TCTCGTTAAG AGATGCACTA
TCAGTAGAAG GTGAGAAAAA CTTTACTTTA ACAGGTCAAG ATCGCTTAAT TGTAAAAACC
AAACCAAATT GGCAAGAAGG CTACACCATT GAGTTACAAG GTGAAGTGAT GTTCCCAGGG
GCGTACTCAT TTACCCGTGG TGAGACTTTA CAAGAAGTGA TTGAGCGCGC CGGTGGTTTA
ACAGAATATG CGTATGCTGA TGGCTCAGTC TTTAGTCGCG AACGATTAAA ACGCCTAGAA
GAAGAGCGTT TAAAAATCTT AAACATGCAA CTAAAGCAAG AGATTGGTAA CTTAGCACTG
CGTCGTCAAA ACTCAAGCGC ACAATATACG ACCCCACCAG GTGATGCGAT GTTAATTGCT
GATGAATTGG CGAAAACAGA AGCCATGGGT CGCATGGTTA TTTCTATCCC AAGAGCAATC
GAAGGGGATG AAATTGCCAA CTTAATGCTA GAAAAAGGCG ATAAGCTGTA TATTCCTGCA
AGAAACCCAG TGATCAGCAT CATGGGTGAA GTTCAGTTTG CCTCAAATCA ATTGTTTGAA
CCTAATATGA CAGTGGAAGA ATACATTGAA GTCGCTGGCG GTACTAAAAA ACAAGCCGAT
ACTGACCGTA TTTACGTAGT ACGTGCAGAT GGCTCAGTGA TGGTCCCAAA TAACTCATAC
TGGTTCAGCC GCAGCGATAA ACCACTAGCC CCAGGTGATA CCATTATCGT ACCACTAGAC
ACCGATTACC TAGATGGCCT AAGTACGTTA ACCTCAGCAA CGCAGATCTT GTATCAAATC
GGTGTAGCGT GGAGCGCGAT TAAGGACTAG
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| Protein sequence | MMMKRTLTAS LFAMISTSTM AFTPSAEQMA QFQKLPKSQQ EQLARQYGVD VSVLTGSASP
VHRAKGKTEQ QPVRASAPIV PSVADKSERF SAFGYDMFLG KVKTLTSVDN LPVPNDYVMA
PGDEVAIQIY GKSSEELNLV IDRQGRLNFP EFGPVAVSGQ TFADMQKHLT GIIKQKMLGV
DVLVSMGAMR TMQVYVVGEA TQPGAYNVNG LTTVTQALIA SGGIKESGSL RYVELKRKGR
VVERFDVYDL LLKGDSRSDV RLLSGDTLYI PTKNSSVELH GAVKRPAIYE LKGKTTLSRL
LSFGGGLQPN AFLSKINITR MGSNGYEQFT VDMSTSKGKN FIIKNGDKVV ISKAAESLNN
AVALRGEVAR QGAYNFKQGM KVSDIVSSVR TDLKQNADLN YALIVREINK QRDIEVLQFN
LGEAIANPSS KENLSLKESD QIFVFNSGLD LDYWFKSYAD AEVKVKHSEQ KKNVERVDVE
TGAIIETQSV TTLKTEDIDT VSRGEQQIQK SREKLLTPII DRLKSQATLD NPARLIEVSG
AVKYPGVYPL SRIGTIKQII LAAGGLTEEA YLDSAEWTVR DVNGSELIIE QKKISLRDAL
SVEGEKNFTL TGQDRLIVKT KPNWQEGYTI ELQGEVMFPG AYSFTRGETL QEVIERAGGL
TEYAYADGSV FSRERLKRLE EERLKILNMQ LKQEIGNLAL RRQNSSAQYT TPPGDAMLIA
DELAKTEAMG RMVISIPRAI EGDEIANLML EKGDKLYIPA RNPVISIMGE VQFASNQLFE
PNMTVEEYIE VAGGTKKQAD TDRIYVVRAD GSVMVPNNSY WFSRSDKPLA PGDTIIVPLD
TDYLDGLSTL TSATQILYQI GVAWSAIKD
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