Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0267 |
Symbol | |
ID | 6986407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 314332 |
End bp | 314976 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643378648 |
Product | HTH-type transcriptional regulator, tetR-family |
Protein accession | YP_002261803 |
Protein GI | 209693875 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA AAGACAGAAT AATCCTCGGT GCCTTAACCC TTTTTAACCA AAATGGTGAA CGAAATATCA CCACCAACCA TATTTCGGCG CATCTTGAAA TCAGTCCGGG TAATTTGTAT TACCACTTTG GCAATAAAGA AGCGATCATC AATAGTATTT TTGATAACTA TGCGAACGAG CTAAAAACAC GCTTTAAACC AATGGCAGAA GAAGACCAAT CGACAATGCC TAGTGTACAG ATCATGTTGA GTTATTTAGA TTCGATTTTT GAGTTGATGT GGAACTACCG TTTCTTTTAC GCCAATTTAC CCGATATCTT AAGCAGAGAT ACGGAGTTAA AAGAAAAATA CACCAAAGCA CAAGAATCCC TAAACGATAA CCTTATTAGT ATCATGAAAG GATTTAGAAC TTCAGGCCTT ATTGCGCTTG AAGACGATGA ATTACTCGCG CTAACCAAAA CGTTACACCT CGTATCGTCA TGCTGGATAA GTTACCAAAC CGCACAATTG TCAGATAAAG AAATAACAGA GGCGGTGGTT TATCAAGGCA TGTTACAAAT GCTAAATGTC GTTAGACCAA TAGCAACAGA GCAAGGCAGA GCACAGATAT TAGAATTAGA AGCGCATTAT CAAAGCAGAT TATAG
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Protein sequence | MKTKDRIILG ALTLFNQNGE RNITTNHISA HLEISPGNLY YHFGNKEAII NSIFDNYANE LKTRFKPMAE EDQSTMPSVQ IMLSYLDSIF ELMWNYRFFY ANLPDILSRD TELKEKYTKA QESLNDNLIS IMKGFRTSGL IALEDDELLA LTKTLHLVSS CWISYQTAQL SDKEITEAVV YQGMLQMLNV VRPIATEQGR AQILELEAHY QSRL
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