Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0262 |
Symbol | |
ID | 6986403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 308451 |
End bp | 309521 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643378643 |
Product | ADP-heptose-LPS heptosyltransferase II |
Protein accession | YP_002261798 |
Protein GI | 209693870 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTT TGATCATTGG CCCATCTTGG GTGGGTGATA TGGTGATGTC GCAATCACTG TATATCACAC TAAAACAACA AAACCCTGAC GCTGTTATTG ATGTTATGGC TCCGGCATGG TGTAAGCCTA TTTTGGAACG CATGCCTGAA GTGAACCAAG CGATTGAAAT GCCGCTTGGT CATGGTGCCT TTGATTTGTT TGGTCGCCGC CGTTTAAGTA AGCAGCTTAG CGCTAATAAT TATACTCATG CTTATATCTG CCCTAATTCC GCTAAATCGG CATTAATACC TTGGTTTGCT GGTATTCCAA TTCGTACTGG CTGGAAAGGC GAGATGCGCT ATGGCCTACT TAACGATTTA CGTTCAAATA AGAAATCATT TCAATACATG GTCGAACGCT ATGTGGCATT GGCTCATCCA AAATCAGAGA TGATTAATTC AAGCTCATTA GGTGGGCTAG ATACTTTACC TCGACCTAAG CTTGCTATTG ATGCTGATAC CCAGCAAGCA ATGTTAACTA AATTTTCTCT ATCTGCGGAT AAACCTGTTC TTGGCTTATG CCCTGGTGCG GAATTTGGCC CGGCAAAACA GTGGCCTGTT GAGCATTACG CAGCTGTAGC TAATGAGATG ATTAACCAAG GCTATCAAGT ATGGTTATTT GGTTCAGCAA AAGATAAAGA AACCACTGAA GCCATTAAAT CTTTGGTTCA TTCAGATAAT CAAGCATCGG TATTTAACCT AGCGGGTGAT ACCAGTTTAA TTGAAGCTGT AGATCTGCTT GCTGCTTGTA AAACGGTTGT CAGTAATGAC TCTGGCTTAA TGCATGTAGC TGCTGCTGTC GGTTGTCATG TGGTTGGGGT TTATGGTTCA ACATCACCAA AGTACACGCC ACCATTAGCT GAAAAAGTTG ACATTGTGAG TACAGATATT GAATGTCGCC CTTGTTTTAA ACGCGAGTGT GAATTTAAGC ATTTGAAGTG TCTGACCGAT CTTGATCCAC AACTAGTGCT GGATAAAATT AGTCCCAAAA GCCACTCGAA TGAATCTGTC ATTCAGGTTA CTTCATGTTA A
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Protein sequence | MKILIIGPSW VGDMVMSQSL YITLKQQNPD AVIDVMAPAW CKPILERMPE VNQAIEMPLG HGAFDLFGRR RLSKQLSANN YTHAYICPNS AKSALIPWFA GIPIRTGWKG EMRYGLLNDL RSNKKSFQYM VERYVALAHP KSEMINSSSL GGLDTLPRPK LAIDADTQQA MLTKFSLSAD KPVLGLCPGA EFGPAKQWPV EHYAAVANEM INQGYQVWLF GSAKDKETTE AIKSLVHSDN QASVFNLAGD TSLIEAVDLL AACKTVVSND SGLMHVAAAV GCHVVGVYGS TSPKYTPPLA EKVDIVSTDI ECRPCFKREC EFKHLKCLTD LDPQLVLDKI SPKSHSNESV IQVTSC
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