Gene VSAL_I0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0262 
Symbol 
ID6986403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp308451 
End bp309521 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content42% 
IMG OID643378643 
ProductADP-heptose-LPS heptosyltransferase II 
Protein accessionYP_002261798 
Protein GI209693870 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02195] lipopolysaccharide heptosyltransferase II 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT TGATCATTGG CCCATCTTGG GTGGGTGATA TGGTGATGTC GCAATCACTG 
TATATCACAC TAAAACAACA AAACCCTGAC GCTGTTATTG ATGTTATGGC TCCGGCATGG
TGTAAGCCTA TTTTGGAACG CATGCCTGAA GTGAACCAAG CGATTGAAAT GCCGCTTGGT
CATGGTGCCT TTGATTTGTT TGGTCGCCGC CGTTTAAGTA AGCAGCTTAG CGCTAATAAT
TATACTCATG CTTATATCTG CCCTAATTCC GCTAAATCGG CATTAATACC TTGGTTTGCT
GGTATTCCAA TTCGTACTGG CTGGAAAGGC GAGATGCGCT ATGGCCTACT TAACGATTTA
CGTTCAAATA AGAAATCATT TCAATACATG GTCGAACGCT ATGTGGCATT GGCTCATCCA
AAATCAGAGA TGATTAATTC AAGCTCATTA GGTGGGCTAG ATACTTTACC TCGACCTAAG
CTTGCTATTG ATGCTGATAC CCAGCAAGCA ATGTTAACTA AATTTTCTCT ATCTGCGGAT
AAACCTGTTC TTGGCTTATG CCCTGGTGCG GAATTTGGCC CGGCAAAACA GTGGCCTGTT
GAGCATTACG CAGCTGTAGC TAATGAGATG ATTAACCAAG GCTATCAAGT ATGGTTATTT
GGTTCAGCAA AAGATAAAGA AACCACTGAA GCCATTAAAT CTTTGGTTCA TTCAGATAAT
CAAGCATCGG TATTTAACCT AGCGGGTGAT ACCAGTTTAA TTGAAGCTGT AGATCTGCTT
GCTGCTTGTA AAACGGTTGT CAGTAATGAC TCTGGCTTAA TGCATGTAGC TGCTGCTGTC
GGTTGTCATG TGGTTGGGGT TTATGGTTCA ACATCACCAA AGTACACGCC ACCATTAGCT
GAAAAAGTTG ACATTGTGAG TACAGATATT GAATGTCGCC CTTGTTTTAA ACGCGAGTGT
GAATTTAAGC ATTTGAAGTG TCTGACCGAT CTTGATCCAC AACTAGTGCT GGATAAAATT
AGTCCCAAAA GCCACTCGAA TGAATCTGTC ATTCAGGTTA CTTCATGTTA A
 
Protein sequence
MKILIIGPSW VGDMVMSQSL YITLKQQNPD AVIDVMAPAW CKPILERMPE VNQAIEMPLG 
HGAFDLFGRR RLSKQLSANN YTHAYICPNS AKSALIPWFA GIPIRTGWKG EMRYGLLNDL
RSNKKSFQYM VERYVALAHP KSEMINSSSL GGLDTLPRPK LAIDADTQQA MLTKFSLSAD
KPVLGLCPGA EFGPAKQWPV EHYAAVANEM INQGYQVWLF GSAKDKETTE AIKSLVHSDN
QASVFNLAGD TSLIEAVDLL AACKTVVSND SGLMHVAAAV GCHVVGVYGS TSPKYTPPLA
EKVDIVSTDI ECRPCFKREC EFKHLKCLTD LDPQLVLDKI SPKSHSNESV IQVTSC