| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0251 |
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| Symbol | |
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| ID | 6986392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 296617 |
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| End bp | 297807 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643378633 |
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| Product | capsular polysaccharide biosynthesis protein |
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| Protein accession | YP_002261788 |
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| Protein GI | 209693860 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAA TTCTATCCCT TATCGGTCGT ACCGATGCCT TATTTACACA AGATATTGCT
AGCCATGAAG CTGAACTATC TCGTATCGTC TCTCAATCTC GCTTCCTTGT TCTCGGTGGT
GCAGGATCAA TCGGCCAAGC GGTGACAAAA GAGATCTTCA AGCGTAACCC TCAAAAGCTA
CATGTTGTTG ATATCAGTGA AAACAACATG GTTGAGTTAG TGCGTGATAT TCGTAGCTCA
TTTGGTTACA TCAATGGTGA CTTTCAAACT TTTGCATTAG ATATCGGTTC TATTGAATAT
GATGCGTTTA TCAAAGCCGA TGGCCAGTAT GATTATGTAT TGAATTTATC TGCACTTAAG
CATGTACGTA GTGAAAAAGA TCCATTCACT TTGATGCGTA TGATTGATGT AAACGTGTTT
AATACTGACA AAACAATTCA ACAGTCAATT GATGCTGGCG CGAAAAAATA TTTCTGTGTC
TCTACCGATA AAGCAGCAAA TCCTGTCAAC ATGATGGGTG CTTCAAAGCG CATTATGGAA
ATGTTCTTAA TGCGTAAGAG TGAAAAAATG GCTATCTCTA CCGCTCGTTT TGCGAATGTG
GCTTTTTCTG ACGGCTCTTT GCTTCATGGT TTTAATCAGC GAATTCAAAA GAACCAACCG
ATTGTAGCGC CAAATGACAT CAAACGTTAT TTCGTTACTC CACAAGAGTC AGGTGAACTG
TGTTTAATGT CGTGTATTTT TGGTGAAAAC CGAGACATCT TCTTCCCTAA ATTAAGCGAA
GCACTGCATT TAATTTCGTT CGCAGATATT GCGGTAAAAT ATCTTAAGCA AATTGGTTAT
GAACCTCATT TATGTGACAG CGAAGATGAA GCTCGCGAAT TAGCTAAAAC ATTACCTGCT
CAAGGTAAGT GGCCATGTTT ATTTACCTCT AGTGATACTA CTGGTGAAAA AGATTTTGAA
GAATTTTTCA CTGATAAAGA AACACTAGAT ATGGCGCGTT TTGATAATTT AGGCATCATT
AAAAATGATC CACTTTATCA ACAAGAGTTA CTTGCGCTAT TTGAACAAAA AATAGGTCAA
ATGAAGTCAG ATCGTCAGTG GACTAAAGAA GAAATCGTAC AATTATTCTT TACCATGATC
CCTGATTTTG GGCACAAAGA AACAGGCAAG TACCTTGATA GCAAAATGTA A
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| Protein sequence | MNPILSLIGR TDALFTQDIA SHEAELSRIV SQSRFLVLGG AGSIGQAVTK EIFKRNPQKL
HVVDISENNM VELVRDIRSS FGYINGDFQT FALDIGSIEY DAFIKADGQY DYVLNLSALK
HVRSEKDPFT LMRMIDVNVF NTDKTIQQSI DAGAKKYFCV STDKAANPVN MMGASKRIME
MFLMRKSEKM AISTARFANV AFSDGSLLHG FNQRIQKNQP IVAPNDIKRY FVTPQESGEL
CLMSCIFGEN RDIFFPKLSE ALHLISFADI AVKYLKQIGY EPHLCDSEDE ARELAKTLPA
QGKWPCLFTS SDTTGEKDFE EFFTDKETLD MARFDNLGII KNDPLYQQEL LALFEQKIGQ
MKSDRQWTKE EIVQLFFTMI PDFGHKETGK YLDSKM
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