| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0223 |
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| Symbol | rarD |
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| ID | 6989368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 267419 |
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| End bp | 268336 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643378605 |
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| Product | chloramphenicol-sensitive protein RarD |
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| Protein accession | YP_002261763 |
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| Protein GI | 209693835 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.198756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGACAA CTGAACTTGA ACAACAGCGC ACCCGACAAG GGATTTTGCT CGCGATTGCT
GCTTATACCA TGTGGGGCAT TGCGCCTATT TATTTCAAAA CCATTAATAG TGTTTCTCCA
TTAGAGATCT TAAGTCATCG TGCAATTTGG TCTTTCTTCT TTTTAGCGGG TCTACTCTGT
GTATCTAAAG GTTGGAAAAC AGTATTAAAC ACATTAAAAG ACAAACGAAA AATGACCTAT
TTAGTCACGA CGGGATTATT GGTCGGAACA AATTGGTTAA TCTTTATCTG GGCTGTAAAT
AACAACCATA TGCTCGATGC CAGTTTGGGT TACTATATTA ATCCCTTATT GAATGTTGTA
TTAGGCATGA TCTTTTTGGG TGAGCGTTTA CGTAAATTAC AATGGGTTGC CGTTGCTTGT
GCTGCTATTG GCGTCATTGT TCAATTAATT ACTTTCGGTT CAATTCCTAT CGTCGCTTTA
GCACTTGCGT GTAGTTTTGG GTTTTATGGT TTATTACGAA AAAAAGTCGC TATGGATGCT
CAATCCGGAC TGTTTATTGA AACCTTAGTA ATGCTACCAA TGGCCGCCAT TTATTTATTA
TTCATTGCTG ATTCTGCAAC GTCTAGTTTT ACGAATAACG CAATGAGCCT CAATCTCCTT
CTTATTGCGG CAGGTATCAT CACGACCATT CCATTATTAT GCTTTACTGG AGCAGCCACA
CGATTAAAGC TCTCGACGTT AGGGTTCTTC CAATATATTG GTCCTAGTTT AATGTTCCTG
CTGGCGGTTG GTTTATATGG TGAAGAATTT AGTACAGATA AAGCCATTAC TTTTGCTTTT
ATCTGGAGTG CATTAATTCT GTTTACGGGC GATGCGCTTT TGTATAAAAA AAGAAACCAA
AAAATTAACA CAAAATAA
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| Protein sequence | MPTTELEQQR TRQGILLAIA AYTMWGIAPI YFKTINSVSP LEILSHRAIW SFFFLAGLLC
VSKGWKTVLN TLKDKRKMTY LVTTGLLVGT NWLIFIWAVN NNHMLDASLG YYINPLLNVV
LGMIFLGERL RKLQWVAVAC AAIGVIVQLI TFGSIPIVAL ALACSFGFYG LLRKKVAMDA
QSGLFIETLV MLPMAAIYLL FIADSATSSF TNNAMSLNLL LIAAGIITTI PLLCFTGAAT
RLKLSTLGFF QYIGPSLMFL LAVGLYGEEF STDKAITFAF IWSALILFTG DALLYKKRNQ
KINTK
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