Gene VSAL_I0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0194 
SymbolslmA 
ID6988338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp234260 
End bp234850 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content38% 
IMG OID643378579 
Productnucleoid occlusion protein 
Protein accessionYP_002261737 
Protein GI209693809 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000213488 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAA CAAAAAAAAT AAATCGTCGT GATGAAATAT TACAATCGTT AGCACAAATG 
CTGGAATCTA ACGAAGGCGC TTCACGTATT ACTACCGCAA AACTTGCTAA ACAAGTGGGT
GTATCCGAAG CAGCGTTATA TCGCCACTTT CCAAGCAAGG CAAAAATGTT TGAAGGGTTG
ATTGAGTTTA TTGAAGAATC TCTATTCTCT CGCATCAATC GAATTATAGA AGATGAAAAA
GATACCTTAA AACGTATTGA GTTATTATTA AAACTTCTAC TGGCGTTTGC TGAACGTAAT
CCGGGGTTAA CTCGAATTAT GACAGGTCAC GCATTGATGT TTGAAAATGA ACGTCTTCGT
GAACGAATTA ACCAAATATT CGAACGTATC GAACTGCAAT TTAAACAGAT ATTACGTGAG
CGTATGATTC GTGAAGGTAA AGCATTCCCT GTTGATGAGG GGATTCTTGC TGCACAACTT
GTTGGTCAAG TGGAAGGCAG CTTCTGTCGC TTTGTACGAT CTGATTTCAA ATATCAGCCA
ACCGCAAATT TTAATGAGTA TTGGGCACTA TTAAGTGCTC AGATCCAATA A
 
Protein sequence
MTTTKKINRR DEILQSLAQM LESNEGASRI TTAKLAKQVG VSEAALYRHF PSKAKMFEGL 
IEFIEESLFS RINRIIEDEK DTLKRIELLL KLLLAFAERN PGLTRIMTGH ALMFENERLR
ERINQIFERI ELQFKQILRE RMIREGKAFP VDEGILAAQL VGQVEGSFCR FVRSDFKYQP
TANFNEYWAL LSAQIQ