Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0194 |
Symbol | slmA |
ID | 6988338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 234260 |
End bp | 234850 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643378579 |
Product | nucleoid occlusion protein |
Protein accession | YP_002261737 |
Protein GI | 209693809 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000213488 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACAA CAAAAAAAAT AAATCGTCGT GATGAAATAT TACAATCGTT AGCACAAATG CTGGAATCTA ACGAAGGCGC TTCACGTATT ACTACCGCAA AACTTGCTAA ACAAGTGGGT GTATCCGAAG CAGCGTTATA TCGCCACTTT CCAAGCAAGG CAAAAATGTT TGAAGGGTTG ATTGAGTTTA TTGAAGAATC TCTATTCTCT CGCATCAATC GAATTATAGA AGATGAAAAA GATACCTTAA AACGTATTGA GTTATTATTA AAACTTCTAC TGGCGTTTGC TGAACGTAAT CCGGGGTTAA CTCGAATTAT GACAGGTCAC GCATTGATGT TTGAAAATGA ACGTCTTCGT GAACGAATTA ACCAAATATT CGAACGTATC GAACTGCAAT TTAAACAGAT ATTACGTGAG CGTATGATTC GTGAAGGTAA AGCATTCCCT GTTGATGAGG GGATTCTTGC TGCACAACTT GTTGGTCAAG TGGAAGGCAG CTTCTGTCGC TTTGTACGAT CTGATTTCAA ATATCAGCCA ACCGCAAATT TTAATGAGTA TTGGGCACTA TTAAGTGCTC AGATCCAATA A
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Protein sequence | MTTTKKINRR DEILQSLAQM LESNEGASRI TTAKLAKQVG VSEAALYRHF PSKAKMFEGL IEFIEESLFS RINRIIEDEK DTLKRIELLL KLLLAFAERN PGLTRIMTGH ALMFENERLR ERINQIFERI ELQFKQILRE RMIREGKAFP VDEGILAAQL VGQVEGSFCR FVRSDFKYQP TANFNEYWAL LSAQIQ
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