Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0167 |
Symbol | |
ID | 6988900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 207356 |
End bp | 208414 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643378554 |
Product | nucleotidyl transferase |
Protein accession | YP_002261712 |
Protein GI | 209693784 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTATT CTTGGAAAAA AGTATTAATT AAACCGGAAT CCACCATTGT TGATGCGCTT AGAGTTATTG ATAATGAATC ATTGAGAATC GCATTAGTTG TTAATGATGA ACAGCAGCTC TTAGGTGTAG TTACAGATGG TGATATTCGT AGAAGTATTT TAAATAACTT ACCTTTAGAT ACCCTTGTTG TAGATATCAT GAGTTGCTCA CCTATTACGG CATCAGTGAA TACAGCAAAA GAGCAGTTAG TTAAATTAAT GGAGAGCGAA GGGATTCTTG CGATACCATT AATGGAAGAA AATAAAGTGG TAGGGCTAGA AACGCTCCAT CACTTATTTG AAGAGAAAAC CTATCACAAC CCTGTATTTA TCATGGCAGG TGGCTTTGGT ACGCGTTTGC GTCCTCTAAC AGATTCTTGC CCTAAACCCA TGCTTAAAAT TGGTAATAAG CCAATTTTAG AGACAGTTAT TCGTAGCTTT ATTAAAGCGG GTTTTGTAAA TTTCTATATA TCGACACACT ATATGCCAGA GCAGATCCAG CAGCACTTTG GTGATGGATC TGATTTAGGT GTAAAGATCA GCTATGTTCA TGAAGATTTT CCGCTAGGTA CTGGTGGGGC GCTTGGTTTA CTTCCTGATG ATTTACCAAA AGACCTACCA TTAATCATGA TGAATGGAGA TGTACTTACC AAGGTCGATT TTGAACGTCT ATTAGATTTC CATACAGAAA ATGAAGCCGA TGCAACCATG TGTGTTCGCG AGTACGATTA TCAAATCCCT TATGGCGTGA TTAATGGTGA AGGAAACAAG ATTACAAGTA TGGTAGAGAA ACCAATTCAA CGTTTCTTTG TTAATGCTGG TATTTATGTC GTGTCGCCAC GCGTGATCCA GTCGGTTCCT GAAAATCACC ATATTGATAT GCCAACATTG CTAGAACAGC ATATGAATGA GCGCGATAAC ATTCTTATGT TCCCTATTCA TGAATATTGG TTAGATATCG GTCGTATGGA TGATTTTAAT CGTGCACAAG CGGATATTCA TACTTTGGGT GTTTTATAA
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Protein sequence | MSYSWKKVLI KPESTIVDAL RVIDNESLRI ALVVNDEQQL LGVVTDGDIR RSILNNLPLD TLVVDIMSCS PITASVNTAK EQLVKLMESE GILAIPLMEE NKVVGLETLH HLFEEKTYHN PVFIMAGGFG TRLRPLTDSC PKPMLKIGNK PILETVIRSF IKAGFVNFYI STHYMPEQIQ QHFGDGSDLG VKISYVHEDF PLGTGGALGL LPDDLPKDLP LIMMNGDVLT KVDFERLLDF HTENEADATM CVREYDYQIP YGVINGEGNK ITSMVEKPIQ RFFVNAGIYV VSPRVIQSVP ENHHIDMPTL LEQHMNERDN ILMFPIHEYW LDIGRMDDFN RAQADIHTLG VL
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