Gene VSAL_I0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0159 
SymbolrfaD 
ID6988868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp198490 
End bp199431 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content43% 
IMG OID643378547 
ProductADP-L-glycero-D-mannoheptose-6-epimerase 
Protein accessionYP_002261705 
Protein GI209693777 
COG category[M] Cell wall/membrane/envelope biogenesis
[G] Carbohydrate transport and metabolism 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATTG TAACTGGCGG CGCTGGCATG ATTGGCAGCA ACATTATTAA GTCTTTAAAT 
GACAACGGCT TTAACGATAT CTTAGTGGTT GATAACCTGA AAGATGGCAA AAAATTCAAG
AACCTAGTTG ATCTTGATAT CACTGATTAC ATGGATAAAG AAGATTTCAT TACGCAAATC
ATGGCGGGTG ATGACTTTGG TACAATTGAT GCTATTTTCC ACGAAGGTGC GTGCTCTGCT
ACCACTGAGT GGGATGGCAA ATACATGATG ATGAACAACT ATGAATACTC GAAAGAAGTG
CTTCATTTTT GTATCGAACG TGAGATCCCA TTCTTATACG CATCATCTGC TGCGACTTAT
GGCGATACTG ATACCTTCAT TGAAGAGCGT GAGTACGAAG GTGCATTAAA CGTTTACGGC
TATTCTAAAC AACAGTTTGA TAACTACGTT CGCCGCCTAT GGGCTGATGC TGAAGCGCAC
GGTGAAACGG TTTCTCAAAT TACCGGTTTC CGTTACTTCA ATGTCTATGG TCCTCGTGAG
CAACATAAAG GTTCTATGGC TTCGGTTGCT TTCCATCTGA ACAATCAAAT GAATGCCAGC
GAAGATCCTA AACTGTTTGA GCGCAGTGAT GAATTCAAGC GTGATTTCGT TTACGTGGGT
GATGTGGCTG CGGTTAACTT GTGGTTCTTA GAAAATGGCG TATCAGGTAT TTTCAACTGT
GGTACTGGTC GTGCTGAACC GTTCCGCGCT GTTGCGGATG CGGTAATTAA GCACCACGGT
AAAGGCGAAG TTCAAAGCAT TCCGTTCCCT GAGCATTTAA AAGGCGCATA TCAAGAGTTT
ACGCAAGCAG ATTTAACTAA GTTGCGAGCT GCGGGTTGTG ATGTTGAGTT TAAGTCGGTA
GCTGATGGTG TTGCTGAGTA TATGGCGATT GTTAATAAGT AA
 
Protein sequence
MIIVTGGAGM IGSNIIKSLN DNGFNDILVV DNLKDGKKFK NLVDLDITDY MDKEDFITQI 
MAGDDFGTID AIFHEGACSA TTEWDGKYMM MNNYEYSKEV LHFCIEREIP FLYASSAATY
GDTDTFIEER EYEGALNVYG YSKQQFDNYV RRLWADAEAH GETVSQITGF RYFNVYGPRE
QHKGSMASVA FHLNNQMNAS EDPKLFERSD EFKRDFVYVG DVAAVNLWFL ENGVSGIFNC
GTGRAEPFRA VADAVIKHHG KGEVQSIPFP EHLKGAYQEF TQADLTKLRA AGCDVEFKSV
ADGVAEYMAI VNK