| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0097 |
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| Symbol | |
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| ID | 6986310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 131168 |
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| End bp | 132109 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643378490 |
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| Product | binding-protein-dependent transport system,inner membrane component |
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| Protein accession | YP_002261648 |
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| Protein GI | 209693720 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACACGA CAACTAACCG CGTTCCAACG CGTTGGGAAC GATTTAAATC ATCGGATTTT
TTGTACTATT TCTTACGTGA CAAAGTAGCA ATGTTTAGCT TTGCTGTTTT TGTTGTGTTT
GTATTAGGGG CGCTACTTTC ACCCGTTCTA GCACCAAGTA ATCCATACGA TCTAAGTTCT
ATCGACATCA TGGATTCAGA ATTGCCACCT TCTTGGATGG AGGAAGGAGA TGAACGTTTT
CTTCTCGGAA CCGATGACCA AGGTCGAGAT GTACTTTCAA CGATTCTTTA TGGTTCACGT
TTATCACTGA CGATTGGTTT TCTAGCGGTA GCAGTACAAC TGACTCTCGG TATCGTTATT
GGTCTTTCTG CGGGCTATTT CGGTGGACGA ATTGATAGCT TCTTAATGCG CTTTGCGGAT
GTGCAGTTAT CATTCTCAAC CATGATGGTT GCGATTATCG TTTCAGCTAT CTTTAAAGCC
AGTTTTGGAA CCGAATTCTT TAGTCAGTAC GCGGTGATCA TGTTGGTTGT GATTATTGGT
ATTGCTGAAT GGCCACAATA TGCACGTACT ATTCGCGCCT CTGTATTGGC CGAGAAACAA
AAAGAATACG TTGAAGCGGC TAAAGTGATG GGGTTCCGTT CGCCAAGAAT CATGTTTCGT
CATATTCTGC CGAACTGTTT GTCTCCCATT TTGGTTATTT CTACGGTACA GATTGCAAAT
GCGATTATGT CTGAGGCGGC TCTGTCCTTC TTAGGTTTAG GCCTACCGGT AGACCAACCT
TCATTAGGCT CATTAATCAG TATTGGTTTT AACTATATCT TCTCTGGGTC GTGGTGGATT
ACCGCTTTCC CTGGATTAGT ATTAGTGGCC CTCGTTCTTG TGATTAATTT ACTGGGCGAT
TGGCTGAGAG ACGTGTTTAA TCCTAAAATT TATAAGGGTT AA
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| Protein sequence | MNTTTNRVPT RWERFKSSDF LYYFLRDKVA MFSFAVFVVF VLGALLSPVL APSNPYDLSS
IDIMDSELPP SWMEEGDERF LLGTDDQGRD VLSTILYGSR LSLTIGFLAV AVQLTLGIVI
GLSAGYFGGR IDSFLMRFAD VQLSFSTMMV AIIVSAIFKA SFGTEFFSQY AVIMLVVIIG
IAEWPQYART IRASVLAEKQ KEYVEAAKVM GFRSPRIMFR HILPNCLSPI LVISTVQIAN
AIMSEAALSF LGLGLPVDQP SLGSLISIGF NYIFSGSWWI TAFPGLVLVA LVLVINLLGD
WLRDVFNPKI YKG
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