Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0097 |
Symbol | |
ID | 6986310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 131168 |
End bp | 132109 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643378490 |
Product | binding-protein-dependent transport system,inner membrane component |
Protein accession | YP_002261648 |
Protein GI | 209693720 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACGA CAACTAACCG CGTTCCAACG CGTTGGGAAC GATTTAAATC ATCGGATTTT TTGTACTATT TCTTACGTGA CAAAGTAGCA ATGTTTAGCT TTGCTGTTTT TGTTGTGTTT GTATTAGGGG CGCTACTTTC ACCCGTTCTA GCACCAAGTA ATCCATACGA TCTAAGTTCT ATCGACATCA TGGATTCAGA ATTGCCACCT TCTTGGATGG AGGAAGGAGA TGAACGTTTT CTTCTCGGAA CCGATGACCA AGGTCGAGAT GTACTTTCAA CGATTCTTTA TGGTTCACGT TTATCACTGA CGATTGGTTT TCTAGCGGTA GCAGTACAAC TGACTCTCGG TATCGTTATT GGTCTTTCTG CGGGCTATTT CGGTGGACGA ATTGATAGCT TCTTAATGCG CTTTGCGGAT GTGCAGTTAT CATTCTCAAC CATGATGGTT GCGATTATCG TTTCAGCTAT CTTTAAAGCC AGTTTTGGAA CCGAATTCTT TAGTCAGTAC GCGGTGATCA TGTTGGTTGT GATTATTGGT ATTGCTGAAT GGCCACAATA TGCACGTACT ATTCGCGCCT CTGTATTGGC CGAGAAACAA AAAGAATACG TTGAAGCGGC TAAAGTGATG GGGTTCCGTT CGCCAAGAAT CATGTTTCGT CATATTCTGC CGAACTGTTT GTCTCCCATT TTGGTTATTT CTACGGTACA GATTGCAAAT GCGATTATGT CTGAGGCGGC TCTGTCCTTC TTAGGTTTAG GCCTACCGGT AGACCAACCT TCATTAGGCT CATTAATCAG TATTGGTTTT AACTATATCT TCTCTGGGTC GTGGTGGATT ACCGCTTTCC CTGGATTAGT ATTAGTGGCC CTCGTTCTTG TGATTAATTT ACTGGGCGAT TGGCTGAGAG ACGTGTTTAA TCCTAAAATT TATAAGGGTT AA
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Protein sequence | MNTTTNRVPT RWERFKSSDF LYYFLRDKVA MFSFAVFVVF VLGALLSPVL APSNPYDLSS IDIMDSELPP SWMEEGDERF LLGTDDQGRD VLSTILYGSR LSLTIGFLAV AVQLTLGIVI GLSAGYFGGR IDSFLMRFAD VQLSFSTMMV AIIVSAIFKA SFGTEFFSQY AVIMLVVIIG IAEWPQYART IRASVLAEKQ KEYVEAAKVM GFRSPRIMFR HILPNCLSPI LVISTVQIAN AIMSEAALSF LGLGLPVDQP SLGSLISIGF NYIFSGSWWI TAFPGLVLVA LVLVINLLGD WLRDVFNPKI YKG
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