Gene VSAL_I0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0093 
Symbol 
ID6989087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp124833 
End bp125240 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content44% 
IMG OID643378482 
Productcytochrome c 
Protein accessionYP_002261645 
Protein GI209693717 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0144946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAT CAATTCGTAA CACCATCGTC GCAATAGTTG CTGCATTAAC TTTTTCAACA 
GCCTCTTTTG CTGCAAACAA TGCTGACGAT GCAATTGCTG AGCGAATTAA ACCAGTAGGC
CAAGTCTATT TGGCAAGTGA TGTACCCGTT GTTGAAGAAC CAACCGGTCC TCGTACGGGT
GATCAGGTAT ACAACACCTT TTGTATTGCA TGTCACTCAA CTGGCGCAGC TGGCGCACCA
AAAACTCAAA ATGCAGCAGA TTGGGCTCCT CGTATCGCAA AAGGTATGGA TGTTCTAAAA
GATCATGCGA TTAACGGTTT TAATGCAATG CCAGCACGTG GAACCTGTAT GAATTGTTCT
GATGATGAGC TGGTTGCTGC AATCGACCAT TTAATCAAAG GACTGTAA
 
Protein sequence
MDKSIRNTIV AIVAALTFST ASFAANNADD AIAERIKPVG QVYLASDVPV VEEPTGPRTG 
DQVYNTFCIA CHSTGAAGAP KTQNAADWAP RIAKGMDVLK DHAINGFNAM PARGTCMNCS
DDELVAAIDH LIKGL