Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0093 |
Symbol | |
ID | 6989087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 124833 |
End bp | 125240 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643378482 |
Product | cytochrome c |
Protein accession | YP_002261645 |
Protein GI | 209693717 |
COG category | [C] Energy production and conversion |
COG ID | [COG3245] Cytochrome c5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0144946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAT CAATTCGTAA CACCATCGTC GCAATAGTTG CTGCATTAAC TTTTTCAACA GCCTCTTTTG CTGCAAACAA TGCTGACGAT GCAATTGCTG AGCGAATTAA ACCAGTAGGC CAAGTCTATT TGGCAAGTGA TGTACCCGTT GTTGAAGAAC CAACCGGTCC TCGTACGGGT GATCAGGTAT ACAACACCTT TTGTATTGCA TGTCACTCAA CTGGCGCAGC TGGCGCACCA AAAACTCAAA ATGCAGCAGA TTGGGCTCCT CGTATCGCAA AAGGTATGGA TGTTCTAAAA GATCATGCGA TTAACGGTTT TAATGCAATG CCAGCACGTG GAACCTGTAT GAATTGTTCT GATGATGAGC TGGTTGCTGC AATCGACCAT TTAATCAAAG GACTGTAA
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Protein sequence | MDKSIRNTIV AIVAALTFST ASFAANNADD AIAERIKPVG QVYLASDVPV VEEPTGPRTG DQVYNTFCIA CHSTGAAGAP KTQNAADWAP RIAKGMDVLK DHAINGFNAM PARGTCMNCS DDELVAAIDH LIKGL
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