Gene VSAL_I0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0091 
Symbol 
ID6986305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp121963 
End bp122562 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content37% 
IMG OID643378480 
ProductHTH-type transcriptional regulator, TetR family 
Protein accessionYP_002261643 
Protein GI209693715 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.903201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTC ATTCATTTCA TAAGGATTCA TTTATGAAGG AGAAACGTAG ACTCATTCTT 
GAGTCAGCAG AACAATTACT TGCAACTGAC GGGTTCCGTG GTCTATCAAT GCAAAAAGTG 
GCAAATCAAG CTGGCGTTGC TGCTGGTACC ATTTATCGCT ATTTCGATGA TAAAGAAGCC 
CTGATCCAAG AGATTAAGTT GAATATTCTT CAACGTGTCG CTTGTGCTAT TCAAGAAAAT 
GTATGCAATA CCGACCCTTT AAAAGTTCGC TTTCGTACAA TGTGGTTAAA CATTTGGTAT 
TTTGCTATTT CAGAAAAAAA CACTTTTTTA AATCGCAATC AATATGAATC ATTACCTACA 
ACAGATTTAG TAAAATTTAG GGAACTAGAA AAAGAAATGT TTGCCCAAGT AAATCAACTC 
TTTGTCGATG GACTTGAGCA AGGCGTTTTT AAACCTTTCA ATGTGGAAAT ACTTACAGGC 
CTTAGCTTAG AGACAAGTGT TTGCTTAGCT CGCAGATATG CTCAAGGTAC TTTTACACTA 
ACAGACGATG ATCTCGACTC GGCAATTGAA GCCAGTTGGG ATGCAATTAT TAAACACTAA
 
Protein sequence
MNVHSFHKDS FMKEKRRLIL ESAEQLLATD GFRGLSMQKV ANQAGVAAGT IYRYFDDKEA 
LIQEIKLNIL QRVACAIQEN VCNTDPLKVR FRTMWLNIWY FAISEKNTFL NRNQYESLPT 
TDLVKFRELE KEMFAQVNQL FVDGLEQGVF KPFNVEILTG LSLETSVCLA RRYAQGTFTL 
TDDDLDSAIE ASWDAIIKH