| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0090 |
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| Symbol | |
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| ID | 6986304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 120838 |
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| End bp | 121944 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643378479 |
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| Product | putative multidrug transporter, HlyD family |
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| Protein accession | YP_002261642 |
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| Protein GI | 209693714 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT GGACTTTCTT TATGTTGCTT CTTGCACTAC TTATTTTTGG TAGTGTTATT
GGCTTTAACA TGTTTAAACA GCAAAAAATT GCTGAATTTA TGGCAAACCG CCCTGAACCT
GAATTTCCTG TCACGATAGA AACAGTCAAA GCGTCAACCT GGACTCCAAC TATCGAGGCG
ATTGGTTTTA TTGAACCAAA CCAAGGTGTA ACACTAACCA CTGAATCAAA CGGTGTGATC
GATAAAATTT CATTTGATTC TGGTAGCCAA GTAAAAGATG ACCAATTGCT TATTTCTCTT
GATTCTAAAG TAGAAAAAGC AAACTTAAGA AGCTCTCAAG CACGCCTACC TGCTGCTGAA
GCAAAATATA AACGCTATAA AGGTTTATTT AAAAAAGGGT CTATCTCTAA AGAAGCTTAC
GATGAAGCAG AAGCAAATTT CTTCTCTCTT GCTGCTGATA TTGAAGGCCT AAAAGCGACT
ATTGAGCGTC GTGAAATCAA AGCACCATTT GCTGGTGTCA TTGGTATCCG TAATGTTTAT
CTTGGTCAAT ACTTACAACC AGGTACTGAT ATTGTCCGTC TAGAAGACAC TAGCATTATG
CGTTTACGCT TTACGGTGCC TCAAACTGAT ATTTCTCGCA TTAATATCGG ACAAGACATC
GATATATACA TCGACTCTTA TCCAACTGAG ACTTTCAAAG GGTCGATCAG TGCAATTGAA
CCAGCGGTAA ATATTCAAAG TGGGTTAATT CAGGTTCAAG CTGATATTCC AAATAATGGT
GGTAAGCTAC GTAGTGGTAT GTTTGCTCGC GCTGAAATCA TTCTCCCAGC ATTTGAAAAC
CAAGTGGTTA TTCCTCAAAC CTCAATTACA TTCACGCTAT ATGGTGACAA TGTCTACATC
GTTTCTGATG TTGACGGTGT TAAACGTGTT AAACAAGCGG TTGTAAAAGT AGGTGAACGA
ACTAAAGCTG TTGCTCATAT TCTTGATGGT GTTAAACCTG GAGATATGGT CGTGACATCA
GGACAAGTTC GTCTAAGTAA CGATGCAAAA GTGCGTGTTG TCGAAAGTGA CGCAACAACG
CCGCCTGCTG AAACACCAAT GTTGTAA
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| Protein sequence | MKKWTFFMLL LALLIFGSVI GFNMFKQQKI AEFMANRPEP EFPVTIETVK ASTWTPTIEA
IGFIEPNQGV TLTTESNGVI DKISFDSGSQ VKDDQLLISL DSKVEKANLR SSQARLPAAE
AKYKRYKGLF KKGSISKEAY DEAEANFFSL AADIEGLKAT IERREIKAPF AGVIGIRNVY
LGQYLQPGTD IVRLEDTSIM RLRFTVPQTD ISRINIGQDI DIYIDSYPTE TFKGSISAIE
PAVNIQSGLI QVQADIPNNG GKLRSGMFAR AEIILPAFEN QVVIPQTSIT FTLYGDNVYI
VSDVDGVKRV KQAVVKVGER TKAVAHILDG VKPGDMVVTS GQVRLSNDAK VRVVESDATT
PPAETPML
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