Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0082 |
Symbol | |
ID | 6989037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 84360 |
End bp | 84917 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643378445 |
Product | hypothetical protein |
Protein accession | YP_002261634 |
Protein GI | 209693706 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.687702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAGAATC TAGATCAAGT CGTAAAAGCC TTAAATAACG GTGGTGTAAT TGCCTATCCT ACGGAGGGGG TTTTTGGTGT TGGCTGTGAT CCGGATAATG AATTTGCACT CCATCAATTA TTAAAAGTGA AACAACGCCC GCGAGAAAAA GGGTTGATTT TAATTGCGGC CTCTATTGAT CAATTGCTTC CTTATATTGA TTTAGCGCAA TTAAATAATG ATCAAATTAA TAGGATTAAA TTCACTTGGC CGGGTCCCGT AACTTGGATT GTCCCTGTTA ATAAGAACAC GTTACCTTTA GTGACTGGCC AGTTTGATAG TATTGCCGTT AGAGTCTCAG CTCACCCTCA AGTTAAAGCT ATTTGTTCTG CGTTTGGGAA GCCGATTACG TCAACTAGTG CAAATCTTTC AGGTTATGAA CCTTGCCGAA CGGTTTTAGA AGTTGAAGAG CAGCTAGGTG ATTTAGGCGT GGTGGTTTTT CAAGGCGAAA TTGGCAACCG AACTCAACCA ACAGAAATCC GTGATGCAAA AACTGGAGAG ACATTACGCC AAGGCTAA
|
Protein sequence | MKNLDQVVKA LNNGGVIAYP TEGVFGVGCD PDNEFALHQL LKVKQRPREK GLILIAASID QLLPYIDLAQ LNNDQINRIK FTWPGPVTWI VPVNKNTLPL VTGQFDSIAV RVSAHPQVKA ICSAFGKPIT STSANLSGYE PCRTVLEVEE QLGDLGVVVF QGEIGNRTQP TEIRDAKTGE TLRQG
|
| |