Gene VSAL_I0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0082 
Symbol 
ID6989037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp84360 
End bp84917 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content41% 
IMG OID643378445 
Producthypothetical protein 
Protein accessionYP_002261634 
Protein GI209693706 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.687702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAATC TAGATCAAGT CGTAAAAGCC TTAAATAACG GTGGTGTAAT TGCCTATCCT 
ACGGAGGGGG TTTTTGGTGT TGGCTGTGAT CCGGATAATG AATTTGCACT CCATCAATTA
TTAAAAGTGA AACAACGCCC GCGAGAAAAA GGGTTGATTT TAATTGCGGC CTCTATTGAT
CAATTGCTTC CTTATATTGA TTTAGCGCAA TTAAATAATG ATCAAATTAA TAGGATTAAA
TTCACTTGGC CGGGTCCCGT AACTTGGATT GTCCCTGTTA ATAAGAACAC GTTACCTTTA
GTGACTGGCC AGTTTGATAG TATTGCCGTT AGAGTCTCAG CTCACCCTCA AGTTAAAGCT
ATTTGTTCTG CGTTTGGGAA GCCGATTACG TCAACTAGTG CAAATCTTTC AGGTTATGAA
CCTTGCCGAA CGGTTTTAGA AGTTGAAGAG CAGCTAGGTG ATTTAGGCGT GGTGGTTTTT
CAAGGCGAAA TTGGCAACCG AACTCAACCA ACAGAAATCC GTGATGCAAA AACTGGAGAG
ACATTACGCC AAGGCTAA
 
Protein sequence
MKNLDQVVKA LNNGGVIAYP TEGVFGVGCD PDNEFALHQL LKVKQRPREK GLILIAASID 
QLLPYIDLAQ LNNDQINRIK FTWPGPVTWI VPVNKNTLPL VTGQFDSIAV RVSAHPQVKA
ICSAFGKPIT STSANLSGYE PCRTVLEVEE QLGDLGVVVF QGEIGNRTQP TEIRDAKTGE
TLRQG