| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0080 |
|---|
| Symbol | purK |
|---|
| ID | 6989439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 82555 |
|---|
| End bp | 83673 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643378443 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
|---|
| Protein accession | YP_002261632 |
|---|
| Protein GI | 209693704 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
|---|
| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00483386 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAG TTCTTGTACT CGGTTCTGGT CAACTCGCTC GCATGATGTC TTTAGCGAGT
GCTCCACTAA ATATCGACAT TATCGCTTAT GATGTGAACA ACAACAAAAT TGTACACCCA
TTAACGCAAC AGGTCATGGA TACGACTTTA GAGCAAACAA TTAATAGCGT TGATGTTATT
ACCGCAGAAT TTGAACACAT TCCTTACGAC ATCTTAGATA TTTGCAGTCA AAGTGGTAAG
TTTCAGCCAA ACCCCGAAGC CATTAAAGCT GGCGGCGATC GTCGTATTGA GAAAACACTA
CTTGATAATG CCAATGTGGC CAATGCAACA CACCATATAA TTACAACTAA GCAAGAGTTC
TTAGACTCAA TTAGTAGCGT AGGTCTTCCT ATGGTGTTAA AAAGTGCTCT AGGTGGGTAC
GACGGAAAAG GGCAATGGCG CTTAAAGGAA GCTTCTCAAA TTGATCATAT TTGGGAAGAA
ATGAATGAAC TAATTCAGAG CACACCAAAT CAAGCCATCG TTGCTGAGCA ATTTATTCCG
TTTAATCGCG AAGTTTCTTT AATTGGTGCC CGTAATAAGA ATGGCGATAT AGTGACATAC
CCATTAACAG AGAACGTTCA TGTTAATGGT GTATTAGCGT TATCTACCGC ATTAGAAGGA
ACAAGCTTAT TACAGCAACA AGCTGATGAC ATGTTCTCTG CAATCGTGAA TGAACTCGAT
TATATTGGCG TACTTGCTAT TGAGTTTTTT GATGTAGATG GTCAACTGCT CGTTAATGAA
ATTGCACCTA GAGTACATAA CTCTGGTCAT TGGACCCAAC AGGGAACCGA TGTATGTCAA
TTTGAAATGC ATATTCGTGC AGTATGTAAT TTACCATTAG TCGGAGCAGA ATTGATTCGT
TCAACCGCCA TGATTAATAT CTTAGGTGAA GACTCTTTAC CGAAAGAACT CCTCACTATG
CCTCATTGCC ATATTCACTG GTATGGCAAA GAAAAACGTG TTGGTAGGAA GATGGGACAT
ATAAATGTAT GTGCATCATC ACCAGAGGCT TTAGAAAAAG AATTAATGGC ACTCTCTGAA
TTATTAGATA AAAATGCATT TCAAGTATTA TCAAAATAA
|
|---|
| Protein sequence | MMKVLVLGSG QLARMMSLAS APLNIDIIAY DVNNNKIVHP LTQQVMDTTL EQTINSVDVI
TAEFEHIPYD ILDICSQSGK FQPNPEAIKA GGDRRIEKTL LDNANVANAT HHIITTKQEF
LDSISSVGLP MVLKSALGGY DGKGQWRLKE ASQIDHIWEE MNELIQSTPN QAIVAEQFIP
FNREVSLIGA RNKNGDIVTY PLTENVHVNG VLALSTALEG TSLLQQQADD MFSAIVNELD
YIGVLAIEFF DVDGQLLVNE IAPRVHNSGH WTQQGTDVCQ FEMHIRAVCN LPLVGAELIR
STAMINILGE DSLPKELLTM PHCHIHWYGK EKRVGRKMGH INVCASSPEA LEKELMALSE
LLDKNAFQVL SK
|
|---|
| |