Gene VSAL_I0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0073 
SymbolrsmB 
ID6989317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp76303 
End bp77637 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content43% 
IMG OID643378436 
Productribosomal RNA small subunit methyltransferase B 
Protein accessionYP_002261625 
Protein GI209693697 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATA TCGTATTTGC CATTTTATTT TGCCAATCAT ATTTAGGTGA TGACATGAAC 
GTTCGTGCTG CGGCAGCCAA AGTTATTTAT CAAGTTGTCG ATCAGGGTCA TTCTCTCTCT
TCAGCGCTTC CAAAGGCTCA ATCTGAGATC AAGCCTCGTG ACCAAGCCTT ATTGCAAGAA
ATTTGCTACG GCGTACTGCG CTTTCTTCCT CGTTTAGAGT CGGTTGCTCA ATCCTTAATG
GATAAACCAT TAAAAGGAAA GCAACGTGTT TTCCATCATC TGATCCTAGT TGGTATTTAT
CAACTTAGTT TCATGCGTAT TCCTGCACAC GCTGCGGTAG GCGAAACCGT TGAAGGCACT
AAAAACCTAA AAGGTCCAAA ACTGCGTGGT TTGATCAACG GTGTACTTCG AAGCTACCAA
CGTAGCCAAG AAGAATTAGA TGCAAAATCA ATCAGTCACG ATTCAGGTAA ATACGGTCAC
CCTGGTTGGT TGCTAAAAAT GCTAAAAGAA GCGTACCCAA CACAATGGGA ATCGATTGTT
GAAGCAAACA ACAGCAAAGC ACCTATGTGG TTACGAGTTA ATAGCCAACA CCACACTCGT
GATGAATACA TTGCATTACT TGAAAAAGAA GAGATTGCAG TAACCCCTCA CAGCCAAGCA
ACAGACGCTT TGTTATTAGA TAAAGCGCGT GATGTATTTA CATTGCCAGG CTTCGAAAAA
GGGTGGGTAT CCGTACAAGA TGCCGCTGCA CAGCTATCTG TTGAGTATCT ACAACCACAA
GATGGTGAGC TGATTTTAGA TTGCTGTGCC GCTCCAGGTG GTAAAACGGC GCACATTCTA
GAGCGCACTA AAAACACCAA CGTTGTCGCT ATTGATTGTG ATGAAACTCG CTTAACCCGT
GTTTACGAAA ATCTAGAACG TTTAAATCTT GAAGCTAAAG TGATTTGTGG CGATGCTCGT
CACCCTGAAG AATGGTGGCA AGGTGAACAA TTTGATCGCA TTTTATTAGA TGCGCCTTGT
TCTGCAACCG GAGTTATCCG CCGCCACCCA GATATTAAAT GGCTACGTCG TTCAGAAGAC
ATCAAGGCAC TTGCAGAATT ACAAAGTGAA ATCTTTGATG CAATGTGGCT ACAACTAAAA
TCAGGCGGCA CCATGGTGTA TGCAACTTGC TCAATCACAC CACAAGAAAA CGGTGATCAA
GTAAAAGCCT TTTTAGAACG TACTGAAAAC GCGTCTCTGG TGGATAATAC AGACCCAGCA
AAACCTGGAC GTCAAATTCT TCCTGGTGAA GAAAATATGG ATGGCTTCTA TTACGCCGTT
CTACAAAAAG CATAA
 
Protein sequence
MANIVFAILF CQSYLGDDMN VRAAAAKVIY QVVDQGHSLS SALPKAQSEI KPRDQALLQE 
ICYGVLRFLP RLESVAQSLM DKPLKGKQRV FHHLILVGIY QLSFMRIPAH AAVGETVEGT
KNLKGPKLRG LINGVLRSYQ RSQEELDAKS ISHDSGKYGH PGWLLKMLKE AYPTQWESIV
EANNSKAPMW LRVNSQHHTR DEYIALLEKE EIAVTPHSQA TDALLLDKAR DVFTLPGFEK
GWVSVQDAAA QLSVEYLQPQ DGELILDCCA APGGKTAHIL ERTKNTNVVA IDCDETRLTR
VYENLERLNL EAKVICGDAR HPEEWWQGEQ FDRILLDAPC SATGVIRRHP DIKWLRRSED
IKALAELQSE IFDAMWLQLK SGGTMVYATC SITPQENGDQ VKAFLERTEN ASLVDNTDPA
KPGRQILPGE ENMDGFYYAV LQKA