| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0053 |
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| Symbol | ilvD |
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| ID | 6988705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 56735 |
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| End bp | 58207 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643378422 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_002261611 |
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| Protein GI | 209693683 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACCA CTCCTAAAAA CAGATACCGT TCAGCTACCA CCACTCATGG CCGTAATATG
GCTGGCGCAC GCGCACTATG GCGTGCAACT GGCGTAAAAG AAGAAGACTT TGGCAAGCCA
ATTATTGCCG TAGTGAATTC ATTCACCCAA TTTGTACCCG GTCATGTTCA TCTTAAAGAT
ATGGGGCAAT TAGTGGCAGG CGAGATTGAG AAAGCAGGTG GTATCGCCAA AGAATTCAAT
ACCATTGCTG TCGATGATGG CATCGCAATG GGACACGGAG GCATGTTGTA CTCATTGCCA
TCTCGTGAAC TGATCGCAGA TTCCGTTGAA TACATGGTGA ATGCACACTG TGCTGATGCC
ATGGTATGTA TTTCAAACTG TGACAAGATT ACTCCAGGAA TGATGATGGC GGCAATGCGT
CTAAATATCC CAGTAATTTT CGTCTCTGGC GGCCCAATGG AAGCAGGCAA AACTAAACTT
TCAGATCAAA TCATTAAACT TGATTTAGTT GATGCCATGA TCCAAGGCGC TGATCCAACG
GTTTCTGATG CACAAAGCGA GCAAATAGAA CGTTCAGCGT GTCCAACTTG TGGTTCATGT
TCTGGTATGT TTACCGCCAA CTCAATGAAC TGTTTAACTG AAGCATTAGG GTTATCTCAA
CCGGGTAATG GATCAATGCT TGCTACTCAT GCCGATCGTG AAGAATTGTT TATCAATGCA
GGTAAACGCA TCGTGACTCT AACTAAGCGT TATTACGAGC AAGGCGATGA TTCGGCTCTG
CCACGTAATA TTGCCAACAA AGCGGCATTT GAAAATGCAA TGGCGTTAGA TATTGCAATG
GGCGGTTCAA GTAATACGGT ACTTCACCTA ATAGCATCCG CTCAAGAAGG CGGCCTAGCG
GTTCTTTCTG GTAATATCGC GGTTGACGGC TGTATTGTAA AAACAGCCGG TGTTGATGAA
GATAACCTTA AATTCCAAGG TCCTGCCATT GTATTTGAAA GCCAAGATAC CGCTGTAGAA
AATATTTTAG CCGGAGAAGT AAAAGCAGGG AATGTGGTTG TTATTCGCTA CGAAGGTCCT
AAAGGCGGCC CGGGTATGCA AGAAATGTTG TACCCAACCA CTTACCTAAA ATCAATGGGA
TTAGGTAAAG CATGTGCATT ACTTACTGAT GGCCGTTTCT CTGGCGGGAC TTCTGGTCTT
TCTATTGGTC ATGCCTCTCC AGAAGCCGCA AGTGGTGGCA CAATTGGTTT AGTCAAAACA
GGAGATATCA TCACTATTGA TATTCCAAAC CGCTCTATCA CGCTTGATGT ACCAGAAGCG
GAATTAAGCG AGCGTCGTGC AGAGCAAGAT AAGTTAGGTT GGAAGCCTGT TAATCGTCAA
CGTGAAGTCT CTTTTGCACT AAAAGCTTAC GCAATGATGG CGACCAGTGC AGATAAAGGC
GCGGTACGTG ATAGATCTAA GTTAGAAGGG TAA
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| Protein sequence | MSTTPKNRYR SATTTHGRNM AGARALWRAT GVKEEDFGKP IIAVVNSFTQ FVPGHVHLKD
MGQLVAGEIE KAGGIAKEFN TIAVDDGIAM GHGGMLYSLP SRELIADSVE YMVNAHCADA
MVCISNCDKI TPGMMMAAMR LNIPVIFVSG GPMEAGKTKL SDQIIKLDLV DAMIQGADPT
VSDAQSEQIE RSACPTCGSC SGMFTANSMN CLTEALGLSQ PGNGSMLATH ADREELFINA
GKRIVTLTKR YYEQGDDSAL PRNIANKAAF ENAMALDIAM GGSSNTVLHL IASAQEGGLA
VLSGNIAVDG CIVKTAGVDE DNLKFQGPAI VFESQDTAVE NILAGEVKAG NVVVIRYEGP
KGGPGMQEML YPTTYLKSMG LGKACALLTD GRFSGGTSGL SIGHASPEAA SGGTIGLVKT
GDIITIDIPN RSITLDVPEA ELSERRAEQD KLGWKPVNRQ REVSFALKAY AMMATSADKG
AVRDRSKLEG
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