| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0042 |
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| Symbol | |
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| ID | 6988708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 44867 |
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| End bp | 46393 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643378411 |
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| Product | putative competence protein |
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| Protein accession | YP_002261600 |
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| Protein GI | 209693672 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0606] Predicted ATPase with chaperone activity |
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| TIGRFAM ID | [TIGR00368] Mg chelatase-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.744278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTAG CAATAATACA CAGTCGAGCA TGCGTTGGTG TTGAAGCGCC AGAGGTTACC
GTTGAGGTTC ATATTAGTAA TGGAATGCCG GGTTTTAATT TAGTTGGGTT ACCAGAAACA
ACAGTAAAAG AAGCCAAAGA CAGAGTAAGA AGCGCGATAA TAAATTCAAA CTTTGAATTT
CCATCAAAAA AGATCACCGT AAACTTAGCG CCTGCTGATT TACCAAAAGA AGGTGGGCGA
TTCGATCTCC CGATAGCCTT AGGTATTTTG GCTGCCTCAG ATCAAATCCC AAATCATAAA
TTAAAAGATC ATGAGTTTGT GGGTGAGCTC GCTTTGTCTG GTGAATTACG ACGAGTGAAA
GGCGTGCTAC CTGCGGCTCT CGCGTCATTA AAAGCCAATC GAAGTTTAAT TGTTCCTGAT
GAAAATGGAG ATCAAGCGGC TTTGGTTGGT GCGAATGTAC ATAAGTCTGC GCCTCACCTT
CTATCGGTTT GTGGCTTTTT ATGTGGGCAA CAGCAACTGG GTTTATTTAC GTCTCCGGTT
ATTGAGCACA TTGATTTGCC TTTAGAACGT GATCTCCAAG ATATCATTGG ACAGCAACAA
GGTAAGCGAG CGTTAGAAAT CGCAGCGGCG GGGGGACATA ATTTATTGTA TTTAGGCCCT
CCAGGAACGG GGAAAACAAT GTTGGCATCA CGCATGAGCG ACTTACTGCC TGAAATGACA
AACGATGAAG CGTTAGAGAC TGCCGCAGTC GCGTCACTGA CTCATCAGCA TATTAATGAA
TCAAACTGGC GTACTCGCCC TTTCCGTTCA CCACACCATT CGAGTTCAAT GGCGGCTTTG
GTTGGTGGTG GTTCGATTCC CAGACCGGGT GAAATATCAT TGGCTCACAA TGGCATCTTA
TTTTTAGATG AAATGCCAGA GTTTGAAAGG AAAGTGTTAG ATTCTTTGCG AGAGCCATTA
GAGTCGGGTG AAATTATTAT TTCTCGTGTC GCTAGCAAAA TGCGGTTCCC TGCCCGATTT
CAATTGGTTG GTGCATTAAA CCCGAGTCCG ACTGGATACT ATGAGGGGAA CAATACGAGA
ACAAACCCTC AATTGATTTT ACGTTATCTG AATCGAATAT CCGGTCCCTT GCTTGATCGT
TTTGATATGT CATTGGAGAT CCCTCTTTTG CCTAAAGGGA CGTTAACAGA AGGGGGGGAT
AGAGGCGAAT CAAGTCTCCA AGTTAAAGAA AGGGTTAGGC TTGCTCGTGT GAAAATGCTA
GAGAGAAGTG GGAAAATTAA TGCATTATTG AGTAGCCGAG AGGTTGAAAC TTATTGCCCA
CTAGAAAAGG AAGATGCGGT TTTTCTAGAA GATACACTAT ATCGATTGGG GCTTTCTATT
CGTGCGTATC ATCGAATCAT TAAAGTGGCC AGAACCATTG CTGATTTATC TGGATCAGAG
AACATTCAGC GTATCCATTT GGGTGAGGCC GTTGGTTACC GTGCTATGGA TAGATTATTG
AAACAATTAA GTGCTCAAGC GGTGTAG
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| Protein sequence | MGLAIIHSRA CVGVEAPEVT VEVHISNGMP GFNLVGLPET TVKEAKDRVR SAIINSNFEF
PSKKITVNLA PADLPKEGGR FDLPIALGIL AASDQIPNHK LKDHEFVGEL ALSGELRRVK
GVLPAALASL KANRSLIVPD ENGDQAALVG ANVHKSAPHL LSVCGFLCGQ QQLGLFTSPV
IEHIDLPLER DLQDIIGQQQ GKRALEIAAA GGHNLLYLGP PGTGKTMLAS RMSDLLPEMT
NDEALETAAV ASLTHQHINE SNWRTRPFRS PHHSSSMAAL VGGGSIPRPG EISLAHNGIL
FLDEMPEFER KVLDSLREPL ESGEIIISRV ASKMRFPARF QLVGALNPSP TGYYEGNNTR
TNPQLILRYL NRISGPLLDR FDMSLEIPLL PKGTLTEGGD RGESSLQVKE RVRLARVKML
ERSGKINALL SSREVETYCP LEKEDAVFLE DTLYRLGLSI RAYHRIIKVA RTIADLSGSE
NIQRIHLGEA VGYRAMDRLL KQLSAQAV
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