| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0017 |
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| Symbol | groEL |
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| ID | 6986255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 17172 |
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| End bp | 18809 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643378389 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_002261578 |
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| Protein GI | 209693650 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCTA AAGACGTTAA ATTTGGTAAT GACGCACGAA TCAAAATGCT AGAAGGTGTA
AATGTTCTGG CTGATGCGGT TAAAGTAACT TTGGGTCCTA AGGGTCGTAA CGTTGTTTTA
GATAAATCAT TTGGCGCACC AACGATCACT AAAGATGGTG TTTCTGTTGC ACGTGAAATC
GAACTTGAAG ATAAGTTCCA AAACATGGGC GCACAAATGG TTAAAGAAGT GGCTTCGCAA
GCGAATGACG CGGCGGGCGA CGGAACAACA ACGGCAACCG TTCTTGCTCA AGCTATCATT
GCTGAAGGCC TAAAAGCCGT TGCTGCGGGT ATGAACCCAA TGGATCTTAA ACGTGGTATC
GACAAAGCAG TTATTGCTGC TGTTGAAGCA CTTAAAGATC TATCTGTTCC ATGTGCTGAT
ACAAAAGCGA TCGCGCAAGT AGGTACTATC TCTGCAAACT CTGATTATAC TGTTGGTAAT
CTTATTGCTG AAGCAATGGA AAAAGTAGGT CGTGACGGTG TTATCACTGT TGAAGAAGGC
CAATCTCTTC AAGACGAATT AGACGTTGTT GAAGGTATGC AGTTTGATCG CGGTTACCTA
TCTCCATATT TCGTAAACAA CCAAGAAGCC GGTTCTGTTG ATCTAGACAG CCCATTCATC
TTGCTTGTTG ATAAAAAAGT ATCAAACATC CGTGAATTGC TTCCAACTCT AGAAGCAGTA
GCGAAAGCAT CTCGTCCTCT TCTTATCATC GCTGAAGATA TTGAAGGCGA AGCGCTTGCT
ACTCTAGTTG TGAACAACAT GCGTGGTATC GTTAAAGTTG CAGCGGTTAA AGCACCTGGT
TTTGGTGACC GTCGTAAAGC AATGTTACAA GATATCGCGG CATTAACTGC GGGCTCTGTA
ATTTCAGAAG AGATCGGTTT AGAACTTGAA AAAGTAGTTC TTGAAGATCT TGGTCAAGCG
AAGCGTGTAA CTATTACAAA AGAAACAACA ACTATCATCG ATGGTGCTGG TGATGAGACT
ATTATCTCTG GCCGTGTTTC TCAAATTCGT CAACAAATCG AAGATGCAAC CTCTGACTAC
GATAAAGAAA AACTTCAAGA GCGTGTAGCT AAATTGGCTG GCGGTGTTGC AGTGATCAAA
GTGGGTGCGG CGACTGAAGT TGAGATGAAA GAGAAGAAAG ACCGTGTTGA AGATGCACTT
CACGCGACTC GCGCAGCCGT TGAAGAAGGT GTTGTTGCTG GTGGTGGTGT TGCACTTATC
CGTGCTGCGT CTAAAGTTGT TAACCTTGAA GGTGACAATG AAGAGCAAAC TGTGGGTATT
CGTTTAGCAC TTCGTGCTAT GGAAGCACCA CTTCGTCAAA TCGTTAAAAA CGCAGGTGAA
GAAGATTCAG TTGTTGCTAA CAACGTTCGC GCTGGTGAAG ATAACTACGG TTACAACGCA
GCTACTGGCG TTTACGGCGA CATGATCGAA ATGGGTATTC TTGACCCAAC TAAAGTAACG
CGTTCTGCAC TTCAGTTCGC AGCATCGGTT GCGGGTCTTA TGATCACAAC AGAAGCGATG
ATCACTGATA AGCCACAAGA TTCAAGTTCT TCTATGCCAG ATATGGGCGG CATGGGCGGC
ATGGGCGGCA TGATGTAA
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| Protein sequence | MAAKDVKFGN DARIKMLEGV NVLADAVKVT LGPKGRNVVL DKSFGAPTIT KDGVSVAREI
ELEDKFQNMG AQMVKEVASQ ANDAAGDGTT TATVLAQAII AEGLKAVAAG MNPMDLKRGI
DKAVIAAVEA LKDLSVPCAD TKAIAQVGTI SANSDYTVGN LIAEAMEKVG RDGVITVEEG
QSLQDELDVV EGMQFDRGYL SPYFVNNQEA GSVDLDSPFI LLVDKKVSNI RELLPTLEAV
AKASRPLLII AEDIEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DIAALTAGSV
ISEEIGLELE KVVLEDLGQA KRVTITKETT TIIDGAGDET IISGRVSQIR QQIEDATSDY
DKEKLQERVA KLAGGVAVIK VGAATEVEMK EKKDRVEDAL HATRAAVEEG VVAGGGVALI
RAASKVVNLE GDNEEQTVGI RLALRAMEAP LRQIVKNAGE EDSVVANNVR AGEDNYGYNA
ATGVYGDMIE MGILDPTKVT RSALQFAASV AGLMITTEAM ITDKPQDSSS SMPDMGGMGG
MGGMM
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