| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0012 |
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| Symbol | gyrB |
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| ID | 6989079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 11086 |
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| End bp | 13503 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643378385 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_002261574 |
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| Protein GI | 209693646 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.100397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAA ATTATGATTC ATCGAGTATT AAAGTACTAA AAGGTCTGGA TGCGGTACGT
AAGCGTCCGG GTATGTATAT CGGCGACACC GACGACGGTA CTGGTCTTCA CCACATGGTG
TTTGAGGTTG TCGATAACTC AATCGATGAA GCTCTTGCTG GTCACTGTAG CGACATTATT
GTTACCATTC ATGAAGATGA CTCTGTCTCT GTAAGTGATG ATGGTCGTGG TATACCAACT
GAAATTCACG AAGAAGAAGG CGTATCTGCT GCAGAAGTTA TCATGACGGT ACTTCACGCA
GGTGGTAAGT TTGATGATAA CTCATACAAA GTATCGGGTG GCCTTCACGG TGTTGGTGTT
TCGGTTGTAA ATGCATTATC AGAGAAAGTG GAGCTAACGA TTAATCGTAG AGGCGAAATT
TTCCAACAAA TTTATTGTCA TGGTGTTCCT CAGGCTCCAT TAGCCGTCAT TGGTACAACA
GATACAACGG GTACTAAAAT CCGTTTTTGG CCTAGTGACC AAACGTTCGC AAATATTGAA
TTTGTGTATG ACATTCTAGC AAAACGCTTA CGTGAGCTTT CTTTCTTAAA CTCTGGCGTA
TCTATCCGTC TACAAGATAT GCGTGAAGAA GATAAATCTG ATCACTTCAT GTTTGAAGGT
GGCATCAAAG CGTTTGTTAC TCACTTGAAC CGTAATAAAA CACCAGTACA TCAGAAAATA
TTCTATTTTG ATTCTGAGCG TAAAGAAGAC GGTATTGTTG TAGAAGTAGC GATGCAGTGG
AATGACTCTT ACCAAGAGAA CATTTTCTGT TATACGAATA ACATCCCACA ACGTGATGGC
GGTGCTCACT TATCTGGCTT CCGTTCTGCG TTAACACGTA CTTTGAACTC GTTCATGGAC
AAAGAAGGCT TTTCTAAGAA AGCAAAATCA TCTGCGTCAG GTGATGATGC TCGTGAAGGC
CTAACTGCCG TTGTTTCTGT TAAAGTGCCT GATCCTAAGT TCTCAAGCCA AACTAAAGAT
AAACTGGTTT CTTCAGAAGT GAAGTCAGCG GTTGAATCGG CAATGAACGA AAAACTGGCT
GAATTCTTAG CGGAAAATCC AGGCGAAGCT AAAATGGTTT GTTCTAAAAT CATTGATGCG
GCTCGTGCTC GTGAAGCGGC TCGTAAGGCT CGTGAAATGA CTCGTCGTAA AGGCGCGTTA
GATATCGCTG GTCTTCCTGG TAAGCTGGCT GATTGTCAGG AAAAAGATCC TGCTCAATCT
GAACTATACA TAGTGGAAGG GGACTCTGCT GGCGGTTCAG CCAAGCAGGG ACGTAACCGT
AAAAACCAAG CGATCCTTCC GCTTAAAGGT AAAATTCTAA ACGTAGAAAA AGCACGTTTT
GATAAAATGA TCTCTTCTCA AGAGGTTGGT ACGTTAATTA CTGCACTAGG TTGTGGTATT
GGTCGTGACG AATACAATCC GGATAAATTG CGTTACCACA ACATCATCAT CATGACCGAT
GCCGATGTCG ATGGTTCACA CATCCGTACT TTGCTATTGA CGTTCTTCTA TCGTCAAATG
CCAGAATTGA TTGAACGTGG CTACATCTAC ATTGCTCAAC CACCTCTTTA CAAAGTAAAG
AAAGGCAAAC AAGAGCAATA CATTAAAGAT GAAGAAGCGA TGGCGGAATA TCAAATAACG
CAAGCATTAG ACAATGCTTC GCTTTTTGTT AATCCTCACG AATCAATTTT TGGTCAAGAG
CTTGAAAATT TAATTCGTAA ATTTAACAGT GTAATGAAAC TGCTTGATCG TATGAGTCGC
CGTTACCCAC TGCCATTGTT AAATCGTTTA GTCTACACAT CACGTTTAAC ACAAGATGAG
TGTGAAAACG AAGCGACAGT TCAAGCATGG ACTGAAGCGT TAGTTATCGC ATTGAATGAG
CATGAAACAG GTGCAAGCCA ATACACCGCT GCGCTGCAGT TTAACGAAGA GTTAAACATT
CACCAGCCGA AGCTTGTTGT TCGTACTCAC GGTGTTCAAC ATGAATACGT ACTAAGTGCT
GATTTGCTTA ACTCGAAAGA GTACGGCCGT ATTGCTGAAC TGTCAGAATC ACTGAATGGT
CTGATTGAAG AAGGCGCTTA CGTACAGCGT GGAGAGCGTA AACTAGCGAC CGAAACGTTA
GATGAAGCCA TTGCATGGTT AATTAAAGAC TCTCGTCGTG GTGTGTACTT ACAGCGTTAC
AAAGGTCTGG GTGAAATGAA CCCTGAGCAG CTTTGGGAAA CAACAATGGA TCCTGATTCT
CGCCGTATGA TGCAAGTAAC TATCAACGAT GCGGTAAGTG CGGATGAGTT GTTTACTACG
CTAATGGGTG ATCATGTTGA ACCGCGTCGT AACTTCATTG AAGAAAACGC ATTGCGCGTT
GCTAACTTAG ACGTATAA
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| Protein sequence | MSENYDSSSI KVLKGLDAVR KRPGMYIGDT DDGTGLHHMV FEVVDNSIDE ALAGHCSDII
VTIHEDDSVS VSDDGRGIPT EIHEEEGVSA AEVIMTVLHA GGKFDDNSYK VSGGLHGVGV
SVVNALSEKV ELTINRRGEI FQQIYCHGVP QAPLAVIGTT DTTGTKIRFW PSDQTFANIE
FVYDILAKRL RELSFLNSGV SIRLQDMREE DKSDHFMFEG GIKAFVTHLN RNKTPVHQKI
FYFDSERKED GIVVEVAMQW NDSYQENIFC YTNNIPQRDG GAHLSGFRSA LTRTLNSFMD
KEGFSKKAKS SASGDDAREG LTAVVSVKVP DPKFSSQTKD KLVSSEVKSA VESAMNEKLA
EFLAENPGEA KMVCSKIIDA ARAREAARKA REMTRRKGAL DIAGLPGKLA DCQEKDPAQS
ELYIVEGDSA GGSAKQGRNR KNQAILPLKG KILNVEKARF DKMISSQEVG TLITALGCGI
GRDEYNPDKL RYHNIIIMTD ADVDGSHIRT LLLTFFYRQM PELIERGYIY IAQPPLYKVK
KGKQEQYIKD EEAMAEYQIT QALDNASLFV NPHESIFGQE LENLIRKFNS VMKLLDRMSR
RYPLPLLNRL VYTSRLTQDE CENEATVQAW TEALVIALNE HETGASQYTA ALQFNEELNI
HQPKLVVRTH GVQHEYVLSA DLLNSKEYGR IAELSESLNG LIEEGAYVQR GERKLATETL
DEAIAWLIKD SRRGVYLQRY KGLGEMNPEQ LWETTMDPDS RRMMQVTIND AVSADELFTT
LMGDHVEPRR NFIEENALRV ANLDV
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