| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0011 |
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| Symbol | recF |
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| ID | 6988419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 9989 |
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| End bp | 11068 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643378384 |
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| Product | recombination protein F |
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| Protein accession | YP_002261573 |
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| Protein GI | 209693645 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.10983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTAT CACGTTTAAT TATTAATGAT TTTCGCAATA TTGAAACGTG TGATATTCAA
TTATCTACCG GCTTTAATTT TGTTATCGGT CCTAATGGAA GTGGGAAAAC CAGTGTCCTT
GAAGCGATAT ACTTGCTCGG ACACGGGCGT TCTTTTAAAA GCTCGTTAAC AGGTCGAATT
ATTCGAAATA GCTGTGACGA GCTTTTTATT CATGGTCGAT TTACTACGCC AGAGCAATTT
GAATTGCCAA TCGGCATAAA TAAACAGAGA GATGGCACAA CGGAAGTAAA AATAGGCGGA
GAAAGTGGTC AAAAACTGGC ACAATTAGCC AAGGTTTTAC CACTGCAACT GATTCATCCT
GAAGGGTTTG AGTTGGTAAC TGATGGACCT AAGTTCCGTC GTGCTTTTAT TGATTGGGGA
GTGTTTCACG TGGAACCTGC TTTTTATGAA GCATGGAGCC GAGTGAAACG GTTAACCAAA
CAACGAAATG CCTTATTAAA AACGGCACAA AGCTATCGAG AGTTGAGTTA TTGGGATTTG
GAACTTGCCA ACCTTGCTGA GAAGATAGAT CAGTGGCGAG TGGATTACAT CAATCACATA
TCTGAAGCAA CTCAACAAAT ATGTCAGGCA TTCTTACCAG AATACGACAT AAAGCTGTCA
TACTACCGTG GTTGGGAGAG AGAGACTCCT TATGCGGAAT TGCTTAAACG AAACTTTGAG
CGAGATAAGC AGCTGGGTTA TACCGTCGGC GGCCCAAATA AAGCCGACTT AAGAATTAAA
GTTGCCGGTA CTCCTGTTGA AGATGTGCTG TCTAGAGGTC AACTAAAGTT GATGGTATGT
GCGTTACGAT TAGCACAAGG ACAGCATTTA ACTGAAGCAA CAGGAAAACA GTGCATCTAT
TTAATAGACG ATTTTGCTTC TGAACTGGAT AGCCACCGCC GCCAATTGCT GGCTCAATAT
TTGAAACAAA CAAAGGCACA GGTGTTTATT AGTTCAATTA CTGCTGAACA GATTGCAGAT
ATGCATGATG AAGAAAGCAA GATGTTTGAG ATAGAACATG GCAAAATAGC CCAAGGATAA
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| Protein sequence | MPLSRLIIND FRNIETCDIQ LSTGFNFVIG PNGSGKTSVL EAIYLLGHGR SFKSSLTGRI
IRNSCDELFI HGRFTTPEQF ELPIGINKQR DGTTEVKIGG ESGQKLAQLA KVLPLQLIHP
EGFELVTDGP KFRRAFIDWG VFHVEPAFYE AWSRVKRLTK QRNALLKTAQ SYRELSYWDL
ELANLAEKID QWRVDYINHI SEATQQICQA FLPEYDIKLS YYRGWERETP YAELLKRNFE
RDKQLGYTVG GPNKADLRIK VAGTPVEDVL SRGQLKLMVC ALRLAQGQHL TEATGKQCIY
LIDDFASELD SHRRQLLAQY LKQTKAQVFI SSITAEQIAD MHDEESKMFE IEHGKIAQG
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