| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0008 |
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| Symbol | |
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| ID | 6986250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 6380 |
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| End bp | 7132 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643378381 |
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| Product | putative amino acid ABC transporter,substrate-binding protein |
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| Protein accession | YP_002261570 |
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| Protein GI | 209693642 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00216943 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGGA CAAAACAAAT TCTAACCGGT TTAGCACTCA CTTTAGCGGC AACTCAATTT
GCTCAAGCCG CCACTGAAGT TAAAGTTGGG ATGTCTGGTC GCTATTTCCC ATTTACCTTT
GTTAAGTTGG ACAAACTGCA AGGGTTTGAA GTGGATTTAT GGGATGAAAT TGGTCGTCGT
AATGACTATA AAATAGAATA TGTAACAGCG AGCTTCTCTG GCTTATTTGG TTTATTAGAA
ACCGGTCGAA TTGATACCAT TTCAAATCAA ATAACAAAAA CAGAAGCACG TGAAGCAAAA
TATCTATTTG CTGACCCTTA TGTTGTCGAC GGCGCTCAAA TTACCGTACG TAAAGGCAAT
GAAAGCATTA AAGGCATTGA AGACCTAGCT GGTAAAACCG TTGCCGTAGA TTTAGGGTCT
AACTTTGAGA AACTGTTGCG AGATAACGAC AAATCGAATC AAATTGATAT TAAAACCTAC
GATACAGGCA TTGAACACGA TGTCGCTTTA GGCCGCTCGG ATGCGTTTGT AATGGATCGT
CTTTCTGCTG CACAATTGAT TAAAAAATCA GGTTTGCCGC TACAACTTGC TGGCGAACCT
TTTGAAACCA TTGAAAACGC TTGGCCGTTT GTAAAAAATG AAAAAGGCCA AAAACTTCAA
CAAGAAGTAA ATAAAGCCCT GTCAGAAATG CGTACTGACG GTACCTTGGC TGAAATATCT
CAAAAATGGT TTGATGCAGA CGTAACAAAA TAA
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| Protein sequence | MKWTKQILTG LALTLAATQF AQAATEVKVG MSGRYFPFTF VKLDKLQGFE VDLWDEIGRR
NDYKIEYVTA SFSGLFGLLE TGRIDTISNQ ITKTEAREAK YLFADPYVVD GAQITVRKGN
ESIKGIEDLA GKTVAVDLGS NFEKLLRDND KSNQIDIKTY DTGIEHDVAL GRSDAFVMDR
LSAAQLIKKS GLPLQLAGEP FETIENAWPF VKNEKGQKLQ QEVNKALSEM RTDGTLAEIS
QKWFDADVTK
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